RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 SLC2A4RGQ9NR83 387 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 A0A1W2PPE2 198 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 CEBPZOSA8MTT3 80 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 GLRA1P23415 457 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 BTCP35070 178 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 C5orf46Q6UWT4 87 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 TFAP2EQ6VUC0 442 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 RNF128Q8TEB7 428 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 IL1F10Q8WWZ1 152 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 SDSLQ96GA7 329 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 PBX4Q9BYU1 374 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 TPSD1Q9BZJ3 242 aa12.83□□□□□ -0.36
RTF1-201ENST00000389629 PRSS37A4D1T9 235 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 RAET1LQ5VY80 246 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 OTOSQ8NHW6 89 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 SLC46A1Q96NT5 459 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 MOGAT1Q96PD6 335 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 OR8B4Q96RC9 309 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 LPAR3Q9UBY5 353 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 GOLGB1Q14789 3259 aaKnown RBP12.82□□□□□ -0.36
RTF1-201ENST00000389629 A8MVM7 634 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 PRAMEF26H0Y7S4 382 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 HSPB6O14558 160 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 TRAPPC6AO75865 159 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 HBE1P02100 147 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 C21orf62-AS1Q17RA5 79 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 LCN15Q6UWW0 184 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 ANKRD33Q7Z3H0 272 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 OR13H1Q8NG92 308 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 ZPLD1Q8TCW7 415 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 BTBD17A6NE02 478 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 DUS4LO95620 317 aaKnown RBP12.82□□□□□ -0.36
RTF1-201ENST00000389629 CST4P01036 141 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 HTRA3P83110 453 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 SRSF5Q13243 272 aaKnown RBP12.82□□□□□ -0.36
RTF1-201ENST00000389629 SEH1LQ96EE3 360 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 HEXA-AS1Q9H8Q6 139 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 MMP25Q9NPA2 562 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 CHRNA9Q9UGM1 479 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 YIF1AO95070 293 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 PRTGQ2VWP7 1150 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 DEFB133Q30KQ1 61 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 MCEMP1Q8IX19 187 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 GPR137CQ8N3F9 429 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 CABLES2Q9BTV7 478 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 MAGT1Q9H0U3 335 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 NPDC1Q9NQX5 325 aaPredicted RBP12.82□□□□□ -0.36
RTF1-201ENST00000389629 CUTCQ9NTM9 273 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 MED29Q9NX70 200 aa12.82□□□□□ -0.36
RTF1-201ENST00000389629 CD300LBA8K4G0 201 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 RAB5AP20339 215 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 DRD3P35462 400 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 B2MP61769 119 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 TMPPEQ6ZT21 453 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 ZDHHC22Q8N966 263 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 OR52N5Q8NH56 324 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 EDEM2Q9BV94 578 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 C19orf12Q9NSK7 152 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 FBXL17Q9UF56 701 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 FAM186AA6NE01 2351 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 METTL12A8MUP2 240 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 LINC00587B1AMM8 73 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 C4orf51C9J302 202 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 DNASE2O00115 360 aaPredicted RBP12.81□□□□□ -0.36
RTF1-201ENST00000389629 IGHG1P01857 330 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 MUC1P15941 1255 aaPredicted RBP12.81□□□□□ -0.36
RTF1-201ENST00000389629 THBS2P35442 1172 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 MALLQ13021 153 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 NR0B2Q15466 257 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 CST9LP1Q5W188 147 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 MRGPREQ86SM8 312 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 LGI3Q8N145 548 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 ZNF383Q8NA42 475 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 OR51A2Q8NGJ7 313 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 EMG1Q92979 244 aaKnown RBP12.81□□□□□ -0.36
RTF1-201ENST00000389629 PIK3IP1Q96FE7 263 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 TCTN2Q96GX1 697 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 DEFB126Q9BYW3 111 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 ZNF286AQ9HBT8 521 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 LRP12Q9Y561 859 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 ABOP16442 354 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 C2orf68Q2NKX9 166 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 SOSTQ9BQB4 213 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 ICOSLGO75144 302 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 GSK3AP49840 483 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 SLC25A1P53007 311 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 OR56B2PQ8NGI1 322 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 SLAMF6Q96DU3 332 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 PRRX2Q99811 253 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 NRIP2Q9BQI9 281 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 CHST11Q9NPF2 352 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 R4GMQ9 66 aa12.81□□□□□ -0.36
RTF1-201ENST00000389629 SCN10AQ9Y5Y9 1956 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 ANKRD36A6QL64 1941 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 E5RGE8 158 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 SERPINA7P05543 415 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 CTHP32929 405 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 RBMS3Q6XE24 437 aaKnown RBP12.8□□□□□ -0.36
RTF1-201ENST00000389629 RLN3Q8WXF3 142 aa12.8□□□□□ -0.36
RTF1-201ENST00000389629 SPTSSAQ969W0 71 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms