RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 HSD17B11Q8NBQ5 300 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 ASB5Q8WWX0 329 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 EDAQ92838 391 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 OR10C1Q96KK4 312 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 TSPAN32Q96QS1 320 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 ZNF426Q9BUY5 554 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 KCNJ16Q9NPI9 418 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 AP4M1O00189 453 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 FOXS1O43638 330 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 ABHD16AO95870 558 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 IGHV2-70P01814 119 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 JMJD7P0C870 316 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 THEGLP0DJG4 465 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 HHEXQ03014 270 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 Q6ZS52 159 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 SLC25A43Q8WUT9 341 aaPredicted RBP12.36□□□□□ -0.43
SDC1-202ENST00000381150 MCHR2Q969V1 340 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 INTS12Q96CB8 462 aaKnown RBP12.36□□□□□ -0.43
SDC1-202ENST00000381150 GPER1Q99527 375 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 LMF2Q9BU23 707 aaKnown RBP12.36□□□□□ -0.43
SDC1-202ENST00000381150 POLE3Q9NRF9 147 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 CYTL1Q9NRR1 136 aa12.36□□□□□ -0.43
SDC1-202ENST00000381150 FAM186AA6NE01 2351 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 TRBV5-7A0A0A0MS05 114 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 ZNF205O95201 554 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 CXCR1P25024 350 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 PPICP45877 212 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 SLC17A1Q14916 467 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 PRTGQ2VWP7 1150 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 SLC18B1Q6NT16 456 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 HIST2H3AQ71DI3 136 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 KLHDC3Q9BQ90 382 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 NICN1Q9BSH3 213 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 LOC107986453A0A1B0GWG9 222 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 SERINC4A6NH21 518 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 ZNF727A8MUV8 499 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 HCRTR2O43614 444 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 DUS4LO95620 317 aaKnown RBP12.35□□□□□ -0.43
SDC1-202ENST00000381150 GUSBP08236 651 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 PRF1P14222 555 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 GLRA1P23415 457 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 ZNF684Q5T5D7 378 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 ZNF595Q8IYB9 648 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 EDEM2Q9BV94 578 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 NMNAT2Q9BZQ4 307 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 NRSN2Q9GZP1 204 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 PTGES2Q9H7Z7 377 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 CNTD2Q9H8S5 307 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 CYP8B1Q9UNU6 501 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 LOC101059948A0A1B0GTJ6 334 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 TMEM269A0A1B0GVZ9 245 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 K7EPK0 472 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 SLC2A1P11166 492 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 GPX4P36969 197 aaPredicted RBP12.35□□□□□ -0.43
SDC1-202ENST00000381150 RGS19P49795 217 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 EMP2P54851 167 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 CYCSP99999 105 aaKnown RBP12.35□□□□□ -0.43
SDC1-202ENST00000381150 CDCP2Q5VXM1 449 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 CLEC18BQ6UXF7 455 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 OOSP2Q86WS3 158 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 FAM71E2Q8N5Q1 922 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 NAXEQ8NCW5 288 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 IER2Q9BTL4 223 aa12.35□□□□□ -0.43
SDC1-202ENST00000381150 KIF26BQ2KJY2 2108 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 RP1P56715 2156 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 PMS2P1A4D2B8 440 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 ARRB1P49407 418 aaPredicted RBP12.34□□□□□ -0.43
SDC1-202ENST00000381150 SULT1A1P50225 295 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 BTG2P78543 158 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 ZNF74Q16587 644 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 IAH1Q2TAA2 248 aaPredicted RBP12.34□□□□□ -0.43
SDC1-202ENST00000381150 ASPHD2Q6ICH7 369 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 LINC00114Q6XXX2 140 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 PRSS58Q8IYP2 241 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 LILRB2Q8N423 598 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 AVL9Q8NBF6 648 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 OR52N4Q8NGI2 321 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 OTOSQ8NHW6 89 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 ASB13Q8WXK3 278 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 TMPRSS5Q9H3S3 457 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 UFSP2Q9NUQ7 469 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 HHLA2Q9UM44 414 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 FREM3P0C091 2139 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 GPR37O15354 613 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 OR2C1O95371 312 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 IFNA17P01571 189 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 CD1AP06126 327 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 GIMD1P0DJR0 217 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 SERPINA2P20848 420 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 IGLV3-21P80748 117 aaPredicted RBP12.34□□□□□ -0.43
SDC1-202ENST00000381150 CD226Q15762 336 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 OR14K1Q8NGZ2 314 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 CACFD1Q9UGQ2 172 aa12.34□□□□□ -0.43
SDC1-202ENST00000381150 RCL1Q9Y2P8 373 aaKnown RBP12.34□□□□□ -0.43
SDC1-202ENST00000381150 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 CCDC163A0A0D9SF12 145 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 A0A1W2PPC4 97 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 NPIPB9F8W1W9 429 aa12.33□□□□□ -0.44
SDC1-202ENST00000381150 TNFSF12O43508 249 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms