RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 XRCC2O43543 280 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 NDUFA2O43678 99 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 DCTN3O75935 186 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 CCNB2O95067 398 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 LIPFP07098 398 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 PRKXP51817 358 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 HMGA2P52926 109 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 SFRP4Q6FHJ7 346 aaPredicted RBP14.34□□□□□ -0.11
HMGN1-204ENST00000380749 C16orf87Q6PH81 154 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 LYPD4Q6UWN0 246 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 ZNF841Q6ZN19 808 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 LNX2Q8N448 690 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 OR56B2PQ8NGI1 322 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 OR8D4Q8NGM9 314 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 SLAMF6Q96DU3 332 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 DDOQ99489 341 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 KCNJ15Q99712 375 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 ARL8BQ9NVJ2 186 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 C14orf119Q9NWQ9 140 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 C1orf123Q9NWV4 160 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 ACTR3BQ9P1U1 418 aa14.34□□□□□ -0.11
HMGN1-204ENST00000380749 PRKDCP78527 4128 aaKnown RBP14.33□□□□□ -0.11
HMGN1-204ENST00000380749 VWFP04275 2813 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 hCG_1807616A0A1W2PRN6 198 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 P2RY10O00398 339 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 IFNGP01579 166 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 SLC2A1P11166 492 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 ATP6V1B2P21281 511 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 BLVRAP53004 296 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 CRMP1Q14194 572 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 DEFB112Q30KQ8 113 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 ZNF770Q6IQ21 691 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-204ENST00000380749 CYP2R1Q6VVX0 501 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 PNLDC1Q8NA58 520 aaKnown RBP14.33□□□□□ -0.12
HMGN1-204ENST00000380749 AQP11Q8NBQ7 271 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 OR2T33Q8NG76 320 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 OR6K6Q8NGW6 343 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 TSSK6Q9BXA6 273 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 CENPMQ9NSP4 180 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 CTSZQ9UBR2 303 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 ARL2BPQ9Y2Y0 163 aa14.33□□□□□ -0.12
HMGN1-204ENST00000380749 SOX21Q9Y651 276 aaPredicted RBP14.33□□□□□ -0.12
HMGN1-204ENST00000380749 RIIAD1A6NNX1 92 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 ANKRD30BLA7E2S9 258 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 SRRM5B3KS81 715 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 ZNF879B4DU55 563 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 GYPBP06028 91 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 PSKH1P11801 424 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 ZNF3P17036 446 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 CFHR2P36980 270 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 DDOSTP39656 456 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 MAGEA2P43356 314 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 SLC15A1P46059 708 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 MNAT1P51948 309 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 GRB2P62993 217 aaKnown RBP14.32□□□□□ -0.12
HMGN1-204ENST00000380749 PCK2Q16822 640 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 METTL11BQ5VVY1 283 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 OR8S1Q8NH09 359 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 ZNRF4Q8WWF5 429 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 TMIGD2Q96BF3 282 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 SLITRK2Q9H156 845 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 PRDM13Q9H4Q3 707 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 MAGIXQ9H6Y5 334 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 NOX4Q9NPH5 578 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 N6AMT1Q9Y5N5 214 aa14.32□□□□□ -0.12
HMGN1-204ENST00000380749 A0A1B0GUS0 222 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 TBX1O43435 398 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 TOX4O94842 621 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 SOX14O95416 240 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 GASTP01350 101 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 CRYBA1P05813 215 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 ANXA2P07355 339 aaKnown RBP14.31□□□□□ -0.12
HMGN1-204ENST00000380749 GRPP07492 148 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 SPI1P17947 270 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 MDKP21741 143 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-204ENST00000380749 ANOS1P23352 680 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 HSD11B1P28845 292 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 SLC25A1P53007 311 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 HOXA4Q00056 320 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-204ENST00000380749 TIGD6Q17RP2 521 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 ZNF362Q5T0B9 420 aaPredicted RBP14.31□□□□□ -0.12
HMGN1-204ENST00000380749 TMEM86BQ8N661 226 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 ZNF511Q8NB15 262 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 GATAD2BQ8WXI9 593 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 NMNAT2Q9BZQ4 307 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 MUC13Q9H3R2 512 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 TOR3AQ9H497 397 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 REEP1Q9H902 201 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 SP140LQ9H930 580 aa14.31□□□□□ -0.12
HMGN1-204ENST00000380749 DHRS12A0PJE2 317 aa14.3□□□□□ -0.12
HMGN1-204ENST00000380749 C5orf63A6NC05 138 aa14.3□□□□□ -0.12
HMGN1-204ENST00000380749 ZNF593O00488 134 aaPredicted RBP14.3□□□□□ -0.12
HMGN1-204ENST00000380749 APOC1P02654 83 aa14.3□□□□□ -0.12
HMGN1-204ENST00000380749 GYPAP02724 150 aa14.3□□□□□ -0.12
HMGN1-204ENST00000380749 SFTPBP07988 381 aa14.3□□□□□ -0.12
HMGN1-204ENST00000380749 GRK5P34947 590 aa14.3□□□□□ -0.12
HMGN1-204ENST00000380749 CX3CR1P49238 355 aa14.3□□□□□ -0.12
HMGN1-204ENST00000380749 C11orf91Q3C1V1 193 aa14.3□□□□□ -0.12
HMGN1-204ENST00000380749 TEX30Q5JUR7 227 aa14.3□□□□□ -0.12
HMGN1-204ENST00000380749 RUSC1-AS1Q66K80 236 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms