RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 TMEM269A0A1B0GVZ9 245 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 ZNF726A6NNF4 738 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 MT-ATP6P00846 226 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 ITGA3P26006 1051 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 ACSM1Q08AH1 577 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 SLC35D3Q5M8T2 416 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 LINC00299Q6ZSB3 139 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 CDC20BQ86Y33 519 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 OR1J4Q8NGS1 313 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 CT55Q8WUE5 264 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 RBP7Q96R05 134 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 SLITRK2Q9H156 845 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 FAM86C1Q9NVL1 165 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 TCFL5Q9UL49 500 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 LRP12Q9Y561 859 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 CHCHD2Q9Y6H1 151 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-201ENST00000379433 SERPINF1P36955 418 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 APOBEC1P41238 236 aaKnown RBP9.61□□□□□ -0.87
NEDD9-201ENST00000379433 SLC6A9P48067 706 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 GRK1Q15835 563 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 SLC22A10Q63ZE4 541 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 STAC2Q6ZMT1 411 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 CMTM4Q8IZR5 234 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 SYS1Q8N2H4 156 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 GDPD1Q8N9F7 314 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 OR51A2Q8NGJ7 313 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 OR8S1Q8NH09 359 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 SYNPRQ8TBG9 265 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 THOC3Q96J01 351 aaKnown RBP9.61□□□□□ -0.87
NEDD9-201ENST00000379433 GPX7Q96SL4 187 aaPredicted RBP9.61□□□□□ -0.87
NEDD9-201ENST00000379433 KLK11Q9UBX7 282 aa9.61□□□□□ -0.87
NEDD9-201ENST00000379433 POLEQ07864 2286 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 A0A0G2JK05 382 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 LIPT2A6NK58 231 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 NTN3O00634 580 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-201ENST00000379433 RER1O15258 196 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 KCNAB3O43448 404 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 NPIPB7O75200 414 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 DXOO77932 396 aaKnown RBP9.6□□□□□ -0.87
NEDD9-201ENST00000379433 H2BFMP0C1H6 154 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 RFPL3SP0C7P2 107 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 AVPR2P30518 371 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 BDH1Q02338 343 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 ZFP36L1Q07352 338 aaKnown RBP9.6□□□□□ -0.87
NEDD9-201ENST00000379433 RIN1Q13671 783 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 CNN3Q15417 329 aaKnown RBP9.6□□□□□ -0.87
NEDD9-201ENST00000379433 TATDN3Q17R31 274 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 BCL2L15Q5TBC7 163 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 TMEM205Q6UW68 189 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 PPP1R3EQ9H7J1 279 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 RANGRFQ9HD47 186 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-201ENST00000379433 P4HTMQ9NXG6 502 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 MOKQ9UQ07 419 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 V9GY05 133 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 ATMQ13315 3056 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 SPENQ96T58 3664 aaKnown RBP9.6□□□□□ -0.87
NEDD9-201ENST00000379433 F5H5K5 113 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 ITGB1BP1O14713 200 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 OGG1O15527 345 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 CTAG2O75638 210 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 CSN2P05814 226 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 PATE4P0C8F1 98 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 ADRA2CP18825 462 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 GIFP27352 417 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 DLSTP36957 453 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 PTGDSP41222 190 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 CLDN20P56880 219 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 Q499Y3 187 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 WIPI1Q5MNZ9 446 aaPredicted RBP9.6□□□□□ -0.87
NEDD9-201ENST00000379433 TOMM5Q8N4H5 51 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 UXS1Q8NBZ7 420 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 OR2M3Q8NG83 312 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 PCNPQ8WW12 178 aaKnown RBP9.6□□□□□ -0.87
NEDD9-201ENST00000379433 RNF170Q96K19 258 aa9.6□□□□□ -0.87
NEDD9-201ENST00000379433 RFPL4AA6NLU0 287 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 FTCDNL1E5RQL4 147 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 RFPL4AL1F8VTS6 287 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 ADAM10O14672 748 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 SLC43A1O75387 559 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 IFNA6P05013 189 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 GPR50Q13585 617 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 PGAP1Q75T13 922 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 LRRC28Q86X40 367 aaPredicted RBP9.59□□□□□ -0.87
NEDD9-201ENST00000379433 OIT3Q8WWZ8 545 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 C11orf40Q8WZ69 217 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 ST8SIA1Q92185 356 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 PHYHIPQ92561 330 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 RHOVQ96L33 236 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 WDFY2Q96P53 400 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 NGBQ9NPG2 151 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 IL17BQ9UHF5 180 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 NUP210LQ5VU65 1888 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 LOC100509620A0A075B734 347 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 OR2M5A3KFT3 312 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 FAM166BA8MTA8 275 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 KHDRBS3O75525 346 aaKnown RBP9.59□□□□□ -0.87
NEDD9-201ENST00000379433 ADAP1O75689 374 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 SLC25A1P53007 311 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 MC2RQ01718 297 aa9.59□□□□□ -0.87
NEDD9-201ENST00000379433 GGTLC2Q14390 218 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms