RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 CYB5BO43169 146 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 EDN3P14138 238 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 F2RL1P55085 397 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 DOC2BQ14184 412 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 TAF9Q16594 264 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 C17orf47Q8NEP4 570 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 OR13C8Q8NGS7 320 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 KTI12Q96EK9 354 aaPredicted RBP13.54□□□□□ -0.24
NPHP4-201ENST00000378156 PELI1Q96FA3 418 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 UBL7Q96S82 380 aaPredicted RBP13.54□□□□□ -0.24
NPHP4-201ENST00000378156 GPR84Q9NQS5 396 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 GPR173Q9NS66 373 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 STRAPQ9Y3F4 350 aaKnown RBP13.54□□□□□ -0.24
NPHP4-201ENST00000378156 ST8SIA3O43173 380 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 AADACP22760 399 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 DHRS13Q6UX07 377 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 RHOUQ7L0Q8 258 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 ZNF561Q8N587 486 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 ZBTB44Q8NCP5 570 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 SMIM4Q8WVI0 70 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 CDX2Q99626 313 aaPredicted RBP13.53□□□□□ -0.24
NPHP4-201ENST00000378156 CRLF2Q9HC73 371 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 SLCO1C1Q9NYB5 712 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 TRAV1-2A0A0B4J238 106 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 PRRG2O14669 202 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 IL2RAP01589 272 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 PTHLHP12272 177 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 NPY4RP50391 375 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 EIF3IQ13347 325 aaKnown RBP13.53□□□□□ -0.24
NPHP4-201ENST00000378156 C17orf107Q6ZR85 190 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 DND1Q8IYX4 353 aaKnown RBP13.53□□□□□ -0.24
NPHP4-201ENST00000378156 OR51A4Q8NGJ6 313 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 SEH1LQ96EE3 360 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 C12orf57Q99622 126 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 IGHV3-15A0A0B4J1V0 119 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 GRPP07492 148 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 H2AFB1P0C5Y9 115 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 NOVA1P51513 510 aaKnown RBP13.53□□□□□ -0.24
NPHP4-201ENST00000378156 DUSP2Q05923 314 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 C2orf76Q3KRA6 126 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 OGFOD3Q6PK18 319 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 FAM58AQ8N1B3 248 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 OR5M8Q8NGP6 311 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 C11orf40Q8WZ69 217 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 SPACA5Q96QH8 159 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 GHRLQ9UBU3 117 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 GVINP1Q7Z2Y8 2422 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 ZNF687Q8N1G0 1237 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 C1QTNF6Q9BXI9 259 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 MMP25Q9NPA2 562 aa13.53□□□□□ -0.24
NPHP4-201ENST00000378156 PHF1O43189 567 aaPredicted RBP13.52□□□□□ -0.24
NPHP4-201ENST00000378156 APOA2P02652 100 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 CT62P0C5K7 136 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 DEFB109BQ30KR1 87 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 TOR2AQ5JU69 321 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 OR2G3Q8NGZ4 309 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 BSCL2Q96G97 398 aaPredicted RBP13.52□□□□□ -0.24
NPHP4-201ENST00000378156 NECAP2Q9NVZ3 263 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 A0A1W2PPV9 198 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 OR13C7P0DN81 318 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 DSCR4P56555 118 aaPredicted RBP13.52□□□□□ -0.24
NPHP4-201ENST00000378156 SHBQ15464 509 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 GABRG1Q8N1C3 465 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 SFT2D1Q8WV19 159 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 GNPNAT1Q96EK6 184 aaPredicted RBP13.52□□□□□ -0.24
NPHP4-201ENST00000378156 PTDSS2Q9BVG9 487 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 EXOGQ9Y2C4 368 aaKnown RBP13.52□□□□□ -0.24
NPHP4-201ENST00000378156 R4GMQ9 66 aa13.52□□□□□ -0.24
NPHP4-201ENST00000378156 H7BYZ3 331 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 PLPP2O43688 288 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 CD3DP04234 171 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 MGMTP16455 207 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 SNCAP37840 140 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 BAXQ07812 192 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 Q7L0L9 218 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 OR2I1PQ8NGU4 316 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 INTS12Q96CB8 462 aaKnown RBP13.52□□□□□ -0.25
NPHP4-201ENST00000378156 BARHL1Q9BZE3 327 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 P4HTMQ9NXG6 502 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 ASXL3Q9C0F0 2248 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 ZDBF2Q9HCK1 2354 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 A0A096LPE4 126 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 A0A1W2PPZ6 126 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 PMS2P1A4D2B8 440 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 LGALS8O00214 317 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 TNFSF11O14788 317 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 CLDN1O95832 211 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 CPN1P15169 458 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 PSMB6P28072 239 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 ZNF117Q03924 483 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 HABP2Q14520 560 aaPredicted RBP13.52□□□□□ -0.25
NPHP4-201ENST00000378156 IRF3Q14653 427 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 GPA33Q99795 319 aa13.52□□□□□ -0.25
NPHP4-201ENST00000378156 H7C1Q1 480 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 MT-CO3P00414 261 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 MMP15P51511 669 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 MVDP53602 400 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 P2RX3P56373 397 aa13.51□□□□□ -0.25
NPHP4-201ENST00000378156 ZXDCQ2QGD7 858 aaPredicted RBP13.51□□□□□ -0.25
NPHP4-201ENST00000378156 PHYHD1Q5SRE7 291 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms