RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 SARAFQ96BY9 339 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 SLIRPQ9GZT3 109 aaKnown RBP10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 SLC35D1Q9NTN3 355 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 SLCO1C1Q9NYB5 712 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 KLF13Q9Y2Y9 288 aaPredicted RBP10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 CDK5RAP2Q96SN8 1893 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 KIAA1551Q9HCM1 1747 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 A0A1B0GX78 115 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 IGLV3-25P01717 112 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 MMP15P51511 669 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 BTG2P78543 158 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 LINC00303Q3SY05 128 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 FAM27D1Q5T7N8 215 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 SIGIRRQ6IA17 410 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 PLXDC2Q6UX71 529 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 TMPRSS11FQ6ZWK6 438 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 CXorf67Q86X51 503 aaPredicted RBP10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 RXFP4Q8TDU9 374 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 MRGPRX1Q96LB2 322 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 ARAP2Q8WZ64 1704 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 OR5K3A6NET4 321 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 ADRA2CP18825 462 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 OR5AP2Q8NGF4 316 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 OR13D1Q8NGV5 346 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 OR51F2Q8NH61 342 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 TSLPQ969D9 159 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 REEP6Q96HR9 211 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 OR51I2Q9H344 312 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 TMEM30AQ9NV96 361 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 CLCF1Q9UBD9 225 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 SLC5A6Q9Y289 635 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 RPS19BP1Q86WX3 136 aaKnown RBP10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 SLC37A2Q8TED4 501 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 ARL2-SNX15V9GYD0 113 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 CTRB1P17538 263 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 NKAIN1Q4KMZ8 207 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 SPATA46Q5T0L3 261 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 CTRB2Q6GPI1 263 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 LHFPL2Q6ZUX7 228 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 PBOV1Q9GZY1 135 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 MDC1Q14676 2089 aaKnown RBP10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 SPAG17Q6Q759 2223 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 SPINT2O43291 252 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 OR2J2O76002 312 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 PLAC9Q5JTB6 97 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 SLC38A9Q8NBW4 561 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 OR11G2Q8NGC1 345 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 DERL3Q96Q80 235 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 S1PR5Q9H228 398 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 B3GAT1Q9P2W7 334 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 R4GMQ9 66 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CD1EP15812 388 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 ZNF90Q03938 601 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 PPP1R1CQ8WVI7 109 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 APH1AQ96BI3 265 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 RCL1Q9Y2P8 373 aaKnown RBP10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 UPK1AO00322 258 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CDX4O14627 284 aaPredicted RBP10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 LRP3O75074 770 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 IGLV3-27P01718 113 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 SEMG1P04279 462 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CLEC12BQ2HXU8 276 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 OR2T2Q6IF00 324 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 OR2A14Q96R47 310 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 FAM173AQ9BQD7 235 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 VPS25Q9BRG1 176 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 ZNF331Q9NQX6 463 aaPredicted RBP10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CBY1Q9Y3M2 126 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 KIAA0100Q14667 2235 aaKnown RBP10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 TARM1B6A8C7 271 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 PYCARD-AS1I3L0S3 204 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CT45A6P0DMU7 189 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CT45A5P0DMU8 189 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CT45A7P0DMV0 189 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CT45A8P0DMV1 189 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CT45A9P0DMV2 189 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 AVPR2P30518 371 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 RNF212Q495C1 297 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CT45A2Q5DJT8 189 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CT45A1Q5HYN5 189 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CLLU1Q5K131 121 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 SPANXN5Q5MJ07 72 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 TFAP2EQ6VUC0 442 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CT45A3Q8NHU0 189 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 RHOFQ9HBH0 211 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 FGF22Q9HCT0 170 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 GPR84Q9NQS5 396 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 A0A1W2PNR3 127 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 SIRPB1O00241 398 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 RBP2P50120 134 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 CD300CQ08708 224 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 ZNF787Q6DD87 383 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 GLDNQ6ZMI3 551 aaPredicted RBP10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 ANKRD53Q8N9V6 530 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 C2orf50Q96LR7 162 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 LAT2Q9GZY6 243 aa10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 PLEKHB1Q9UF11 243 aaPredicted RBP10.84□□□□□ -0.67
PCDHA9-201ENST00000378122 TRAPPC4Q9Y296 219 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms