RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 PAQR6Q6TCH4 344 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 SLC36A1Q7Z2H8 476 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 GDF7Q7Z4P5 450 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 SP7Q8TDD2 431 aaPredicted RBP9.77□□□□□ -0.85
HIF3A-205ENST00000377670 SLCO1C1Q9NYB5 712 aa9.77□□□□□ -0.85
HIF3A-205ENST00000377670 LOC100289279A0A1B0GTE1 492 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 C20orf202A1L168 122 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 ZNF728P0DKX0 622 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 HLA-DOBP13765 273 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 ZNF680Q8NEM1 530 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 OR52I2Q8NH67 350 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 SECTM1Q8WVN6 248 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 CORO2AQ92828 525 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 UHRF2Q96PU4 802 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 EXO1Q9UQ84 846 aaKnown RBP9.76□□□□□ -0.85
HIF3A-205ENST00000377670 CSAG2Q9Y5P2 127 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 IGHV5-51A0A0C4DH38 117 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 FRG2CA6NGY1 282 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 C17orf112F2Z3M2 114 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 DCTN6O00399 190 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 SELENOFO60613 162 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 CPN1P15169 458 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 GABRB1P18505 474 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 F2RP25116 425 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 UBE2MP61081 183 aaKnown RBP9.76□□□□□ -0.85
HIF3A-205ENST00000377670 KLRB1Q12918 225 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 RNLSQ5VYX0 342 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 RHOUQ7L0Q8 258 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 PRSS41Q7RTY9 318 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 TMEM179BQ7Z7N9 219 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 GABRG1Q8N1C3 465 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 SUMF1Q8NBK3 374 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 SEMA6DQ8NFY4 1073 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 ANKRD9Q96BM1 317 aaPredicted RBP9.76□□□□□ -0.85
HIF3A-205ENST00000377670 UNC13CQ8NB66 2214 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 PHF1O43189 567 aaPredicted RBP9.76□□□□□ -0.85
HIF3A-205ENST00000377670 CSF3P09919 207 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 BLVRBP30043 206 aaPredicted RBP9.76□□□□□ -0.85
HIF3A-205ENST00000377670 P2RX3P56373 397 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 AQP6Q13520 282 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 TMEM182Q6ZP80 229 aaPredicted RBP9.76□□□□□ -0.85
HIF3A-205ENST00000377670 CDH26Q8IXH8 852 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 FAM58AQ8N1B3 248 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 LINC01555Q8NAE3 123 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 EXTL1Q92935 676 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 PIK3IP1Q96FE7 263 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 SLC25A32Q9H2D1 315 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 SPACA1Q9HBV2 294 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 A4GALTQ9NPC4 353 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 FLVCR2Q9UPI3 526 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 CHST2Q9Y4C5 530 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 TRIM77I1YAP6 450 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 P2RY10O00398 339 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 NAGAP17050 411 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 ZNF266Q14584 549 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 RTP5Q14D33 572 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 GLYATL3Q5SZD4 288 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 ZNF321PQ8N8H1 164 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 CCL17Q92583 94 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 C19orf53Q9UNZ5 99 aaPredicted RBP9.76□□□□□ -0.85
HIF3A-205ENST00000377670 ASPDHA6ND91 283 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 MMP11P24347 488 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 EPHA2P29317 976 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 SUB1P53999 127 aaKnown RBP eCLIP9.76□□□□□ -0.85
HIF3A-205ENST00000377670 ZNF239Q16600 458 aaKnown RBP9.76□□□□□ -0.85
HIF3A-205ENST00000377670 FCRL6Q6DN72 434 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 TMEM65Q6PI78 240 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 C16orf52Q8NHV5 167 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 CNRIP1Q96F85 164 aaPredicted RBP9.76□□□□□ -0.85
HIF3A-205ENST00000377670 VPS25Q9BRG1 176 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 SLC26A1Q9H2B4 701 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 WDR76Q9H967 626 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 NDUFB11Q9NX14 153 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 OR5V1Q9UGF6 321 aa9.76□□□□□ -0.85
HIF3A-205ENST00000377670 SCN3AQ9NY46 2000 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 UMAD1C9J7I0 102 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 CLDN20P56880 219 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 RAB11AP62491 216 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 TIAL1Q01085 375 aaKnown RBP eCLIP9.75□□□□□ -0.85
HIF3A-205ENST00000377670 SNTB1Q13884 538 aaKnown RBP9.75□□□□□ -0.85
HIF3A-205ENST00000377670 FAAP20Q6NZ36 180 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 SFT2D1Q8WV19 159 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.75□□□□□ -0.85
HIF3A-205ENST00000377670 PIGTQ969N2 578 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 YIPF6Q96EC8 236 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 BCO1Q9HAY6 547 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 DUSP22Q9NRW4 184 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 TPRP12270 2363 aaKnown RBP9.75□□□□□ -0.85
HIF3A-205ENST00000377670 HS3ST1O14792 307 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 CPEP16870 476 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 CD80P33681 288 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 HABP2Q14520 560 aaPredicted RBP9.75□□□□□ -0.85
HIF3A-205ENST00000377670 SYT14P1Q58G82 188 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 ANKRD37Q7Z713 158 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 OR2Y1Q8NGV0 311 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 PDCD1LG2Q9BQ51 273 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 RIMS4Q9H426 269 aaPredicted RBP9.75□□□□□ -0.85
HIF3A-205ENST00000377670 CBY1Q9Y3M2 126 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 CACNA1EQ15878 2313 aa9.75□□□□□ -0.85
HIF3A-205ENST00000377670 SCN4AP35499 1836 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms