RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ZFP64Q9NPA5 681 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 NDUFB11Q9NX14 153 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 ZFP92A6NM28 416 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 NUPL2O15504 423 aaKnown RBP12.26□□□□□ -0.45
GPC6-201ENST00000377047 SOX8P57073 446 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 C15orf54Q8N8G6 183 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 ARID1BQ8NFD5 2236 aaPredicted RBP12.26□□□□□ -0.45
GPC6-201ENST00000377047 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.26□□□□□ -0.45
GPC6-201ENST00000377047 SPAARA0A1B0GVQ0 90 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 CDC14BO60729 498 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 UBE2IP63279 158 aaKnown RBP12.26□□□□□ -0.45
GPC6-201ENST00000377047 JMJD6Q6NYC1 403 aaPredicted RBP12.26□□□□□ -0.45
GPC6-201ENST00000377047 SMRP1Q8NCR6 262 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 PRR7Q8TB68 274 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 NUDCD2Q8WVJ2 157 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 RPS10-NUDT3A0A1W2PQS6 291 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 M6PRP20645 277 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 FCGR2CP31995 323 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 RPS10P46783 165 aaKnown RBP12.26□□□□□ -0.45
GPC6-201ENST00000377047 CDK5R1Q15078 307 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 ARHGDIGQ99819 225 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 DLL4Q9NR61 685 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 A0A0B4J203 849 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 C5orf67F2Z3F1 127 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 ATF1P18846 271 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 PRICKLE4Q2TBC4 344 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 TSEN54Q7Z6J9 526 aaKnown RBP12.26□□□□□ -0.45
GPC6-201ENST00000377047 OR10D3Q8NH80 312 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 ZNF75AQ96N20 296 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 NMES1Q9C002 83 aa12.26□□□□□ -0.45
GPC6-201ENST00000377047 OR5G3P0C626 314 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 HOXB3P14651 431 aaPredicted RBP12.25□□□□□ -0.45
GPC6-201ENST00000377047 FAM219BQ5XKK7 198 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 LYPD8Q6UX82 237 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 STAC2Q6ZMT1 411 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 OR2G3Q8NGZ4 309 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 OR2A5Q96R48 311 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 PCYT1BQ9Y5K3 369 aaPredicted RBP12.25□□□□□ -0.45
GPC6-201ENST00000377047 ARRDC5A6NEK1 342 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 SSSCA1O60232 199 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 LYZL6O75951 148 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 POU2F2P09086 479 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 TMIGD3P0DMS9 266 aaPredicted RBP12.25□□□□□ -0.45
GPC6-201ENST00000377047 MYO7AQ13402 2215 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 RPS2P15880 293 aaKnown RBP12.25□□□□□ -0.45
GPC6-201ENST00000377047 DGCR2P98153 550 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 FLI1Q01543 452 aaPredicted RBP12.25□□□□□ -0.45
GPC6-201ENST00000377047 TMEM179BQ7Z7N9 219 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 PATE3B3GLJ2 98 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 ST8SIA3O43173 380 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 NKX2-2O95096 273 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 OR10K2Q6IF99 312 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 RNF141Q8WVD5 230 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 TUBG2Q9NRH3 451 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 JUNBP17275 347 aaPredicted RBP12.25□□□□□ -0.45
GPC6-201ENST00000377047 HOXD12P35452 270 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 SRP14P37108 136 aaKnown RBP12.25□□□□□ -0.45
GPC6-201ENST00000377047 UBE2G1P62253 170 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 NKG7Q16617 165 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 OR2G2Q8NGZ5 317 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 GALMQ96C23 342 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 TAAR6Q96RI8 345 aa12.25□□□□□ -0.45
GPC6-201ENST00000377047 IAPPP10997 89 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 MGMTP16455 207 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 SLC7A5P1Q8MH63 180 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 PCNPQ8WW12 178 aaKnown RBP12.24□□□□□ -0.45
GPC6-201ENST00000377047 UGT2A1Q9Y4X1 527 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 LRP12Q9Y561 859 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 TMEM268Q5VZI3 342 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 B3GNTL1Q67FW5 361 aaPredicted RBP12.24□□□□□ -0.45
GPC6-201ENST00000377047 ORAI1Q96D31 301 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 PTDSS2Q9BVG9 487 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 ZNF705GA8MUZ8 300 aaPredicted RBP12.24□□□□□ -0.45
GPC6-201ENST00000377047 M0QZ24 198 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 GPX5O75715 221 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 CCL4P13236 92 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 THBS4P35443 961 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 ZNF683Q8IZ20 524 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 OR13C8Q8NGS7 320 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 CDCA4Q9BXL8 241 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 MYOZ1Q9NP98 299 aaPredicted RBP12.24□□□□□ -0.45
GPC6-201ENST00000377047 SVBPQ8N300 66 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 C17orf78Q8N4C9 275 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 OR4C3Q8NH37 302 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 SFT2D1Q8WV19 159 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 APOBEC4Q8WW27 367 aaKnown RBP12.24□□□□□ -0.45
GPC6-201ENST00000377047 COX14Q96I36 57 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 TAF9BQ9HBM6 251 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 OSGIN2Q9Y236 505 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 FABP5Q01469 135 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 RAB35Q15286 201 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 HFEQ30201 348 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 OR2T2Q6IF00 324 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 TMEM182Q6ZP80 229 aaPredicted RBP12.24□□□□□ -0.45
GPC6-201ENST00000377047 RIMKLAQ8IXN7 391 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 CARFQ8N187 725 aa12.24□□□□□ -0.45
GPC6-201ENST00000377047 HPP00738 406 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 FMODQ06828 376 aa12.23□□□□□ -0.45
GPC6-201ENST00000377047 ZNF816Q0VGE8 651 aaPredicted RBP12.23□□□□□ -0.45
GPC6-201ENST00000377047 ADIRFQ15847 76 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms