RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FLVCR1-AS1Q8TAF5 88 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 CLDN23Q96B33 292 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 SLC6A7Q99884 636 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 EIF5A2Q9GZV4 153 aaKnown RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 STARD10Q9Y365 291 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 SMCO3A2RU48 225 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 MSGN1A6NI15 193 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 PSMD9O00233 223 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 GMFGO60234 142 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 CYTIPO60759 359 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 RPP14O95059 124 aaKnown RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 DUS4LO95620 317 aaKnown RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 THBS1P07996 1170 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 SNRPCP09234 159 aaKnown RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 FABP4P15090 132 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF28P17035 718 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 RPS15AP62244 130 aaKnown RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 HNF4GQ14541 408 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 TOMM34Q15785 309 aaPredicted RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF627Q7L945 461 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 CARFQ8N187 725 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 OR10AD1Q8NGE0 317 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 OR4K13Q8NH42 304 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 CNRIP1Q96F85 164 aaPredicted RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 LRFN5Q96NI6 719 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 UNKLQ9H9P5 680 aaKnown RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 A0A0J9YY10 115 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 LOC100289279A0A1B0GTE1 492 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 PHOX2AO14813 284 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF432O94892 652 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 CSRP1P21291 193 aaKnown RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 S1PR1P21453 382 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 MC3RP41968 323 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 DIO1P49895 249 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 TRA2BP62995 288 aaKnown RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 RAB11BQ15907 218 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 WDR88Q6ZMY6 472 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 SHISA6Q6ZSJ9 500 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF615Q8N8J6 731 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 CADM4Q8NFZ8 388 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 M1APQ8TC57 530 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 FAM3DQ96BQ1 224 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 ADAM29Q9UKF5 820 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 TRAV8-7A0A075B6U6 113 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 H0YIZ8 118 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 FCMRO60667 390 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 SOD3P08294 240 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 ID4P47928 161 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 PDX1P52945 283 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 C2orf76Q3KRA6 126 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 C1orf189Q5VU69 101 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 RPL7L1Q6DKI1 246 aaKnown RBP10.86□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF836Q6ZNA1 936 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF584Q8IVC4 421 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 TMEM52Q8NDY8 209 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 NUP43Q8NFH3 380 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 TERB2Q8NHR7 220 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 ADAMTS15Q8TE58 950 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 CCDC74AQ96AQ1 378 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 MTHFD2LQ9H903 347 aaPredicted RBP10.86□□□□□ -0.67
C9orf3-203ENST00000375315 ADAP2Q9NPF8 381 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 MMP24Q9Y5R2 645 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 A0A0A6YYD5 115 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 TRBV5-5A0A0J9YX44 114 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF136P52737 540 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 EBPQ15125 230 aaKnown RBP10.86□□□□□ -0.67
C9orf3-203ENST00000375315 OR1Q1Q15612 314 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 NNATQ16517 81 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 OR6K6Q8NGW6 343 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 BAHD1Q8TBE0 780 aaPredicted RBP10.86□□□□□ -0.67
C9orf3-203ENST00000375315 R3HDM4Q96D70 268 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 RBM18Q96H35 190 aaKnown RBP10.86□□□□□ -0.67
C9orf3-203ENST00000375315 YPEL4Q96NS1 127 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 ATG101Q9BSB4 218 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 SLC5A7Q9GZV3 580 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 CRLF2Q9HC73 371 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 SLC2A8Q9NY64 477 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 DNAJB11Q9UBS4 358 aa10.86□□□□□ -0.67
C9orf3-203ENST00000375315 HIST1H2BKO60814 126 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 HIST1H2BJP06899 126 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 ERCC1P07992 297 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-203ENST00000375315 PET100P0DJ07 73 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 EDN3P14138 238 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF25P17030 456 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-203ENST00000375315 AKR1C4P17516 323 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 HIST1H2BOP23527 126 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 HIST1H2BBP33778 126 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 SNCAP37840 140 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 TSPAN7P41732 249 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 OR1D4P47884 311 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 HIST1H2BDP58876 126 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 HIST1H2BCP62807 126 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 COTL1Q14019 142 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 UBE2V2Q15819 145 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 HIST2H2BEQ16778 126 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-203ENST00000375315 LYPD6BQ8NI32 183 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 HIST1H2BHQ93079 126 aa10.85□□□□□ -0.67
C9orf3-203ENST00000375315 PACRGQ96M98 296 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms