RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 NUP214P35658 2090 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-204ENST00000375290 TMEM265A0A087WTH1 108 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 MEIS3P2A8K0S8 358 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 ENPP1P22413 925 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 ST3GAL2Q16842 350 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 ETFRF1Q6IPR1 90 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 LINC00596Q86U02 117 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 HMGCLL1Q8TB92 370 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 APH1AQ96BI3 265 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 TERTO14746 1132 aaKnown RBP9.23□□□□□ -0.93
PTCH1-204ENST00000375290 CHEK1O14757 476 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 STATHP02808 62 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 MT-ND6P03923 174 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 DCTDP32321 178 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 CD200P41217 278 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 MPV17LQ2QL34 196 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 TP53I13Q8NBR0 393 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-204ENST00000375290 AKR1E2Q96JD6 320 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 DERL3Q96Q80 235 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 ARFGEF1Q9Y6D6 1849 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 NKAIN4Q8IVV8 208 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 UBE2FQ969M7 185 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 INSM2Q96T92 566 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-204ENST00000375290 SIGLEC7Q9Y286 467 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 TEX50A0A1B0GTY4 177 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 IGF2P01344 180 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 RPL13AP40429 203 aaKnown RBP9.23□□□□□ -0.93
PTCH1-204ENST00000375290 RNF4P78317 190 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 HTRA3P83110 453 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 TMEM99Q8N816 258 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 SORBS1Q9BX66 1292 aaKnown RBP9.23□□□□□ -0.93
PTCH1-204ENST00000375290 TAS2R4Q9NYW5 299 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 VSX1Q9NZR4 365 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-204ENST00000375290 EN2P19622 333 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-204ENST00000375290 BCL6P41182 706 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 ORAI1Q96D31 301 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 FAM122AQ96E09 287 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 TBX21Q9UL17 535 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 A0A087X0M5 115 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 A0A1B0GX30 115 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 P2RY10O00398 339 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 RRP8O43159 456 aaKnown RBP9.23□□□□□ -0.93
PTCH1-204ENST00000375290 PLRG1O43660 514 aaKnown RBP9.23□□□□□ -0.93
PTCH1-204ENST00000375290 NPBWR1P48145 328 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 PAFAH1B2P68402 229 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 TMEM88Q6PEY1 159 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 CCDC74AQ96AQ1 378 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 KCMF1Q9P0J7 381 aa9.23□□□□□ -0.93
PTCH1-204ENST00000375290 PFN4Q8NHR9 129 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 SLC45A2Q9UMX9 530 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 TRBV5-3A0A0A0MS03 114 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 F11P03951 625 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 DCDP81605 110 aaKnown RBP9.22□□□□□ -0.93
PTCH1-204ENST00000375290 FAM3AP98173 230 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 HOXC5Q00444 222 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 FUT7Q11130 342 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 SLC25A42Q86VD7 318 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 OR10A7Q8NGE5 316 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 WDR61Q9GZS3 305 aaKnown RBP9.22□□□□□ -0.93
PTCH1-204ENST00000375290 ERVS71-1P61550 626 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 CYHR1Q6ZMK1 362 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 GNG12Q9UBI6 72 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 SLCO1B1Q9Y6L6 691 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 ANKRD31Q8N7Z5 1873 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 SUMF1Q8NBK3 374 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 LILRB1Q8NHL6 650 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-204ENST00000375290 GPR87Q9BY21 358 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 RASL12Q9NYN1 266 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 CA14Q9ULX7 337 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 COL18A1P39060 1754 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 LRP3O75074 770 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 HOXD11P31277 338 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-204ENST00000375290 SNRPEP62304 92 aaKnown RBP9.22□□□□□ -0.93
PTCH1-204ENST00000375290 Q96M85 177 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 KLK11Q9UBX7 282 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 ACAD8Q9UKU7 415 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 ZNF816-ZNF321PA0A0X1KG74 233 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 C9orf170A2RU37 121 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 OR52A4PA6NMU1 304 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 YY2O15391 372 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 WFIKKN1Q96NZ8 548 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 RNF167Q9H6Y7 350 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 SH2D1BO14796 132 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 NRASP01111 189 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 HRASP01112 189 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 KRASP01116 189 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 LIPCP11150 499 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 GALNSP34059 522 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 Q6ZSR6 202 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 LIMS2Q7Z4I7 341 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 OXGR1Q96P68 337 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 TRAPPC1Q9Y5R8 145 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 OTOL1A6NHN0 477 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-204ENST00000375290 CNN1P51911 297 aaKnown RBP9.22□□□□□ -0.93
PTCH1-204ENST00000375290 KIAA0040Q15053 153 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 OR5M1Q8NGP8 315 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 DMRT1Q9Y5R6 373 aa9.22□□□□□ -0.93
PTCH1-204ENST00000375290 A0A1W2PPQ1 181 aa9.21□□□□□ -0.93
PTCH1-204ENST00000375290 HLA-DRB3P79483 266 aa9.21□□□□□ -0.93
PTCH1-204ENST00000375290 COL19A1Q14993 1142 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms