RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TCEAL2Q9H3H9 227 aaPredicted RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 METTL8Q9H825 291 aaKnown RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 UNKLQ9H9P5 680 aaKnown RBP4.83□□□□□ -1.64
ATG4A-204ENST00000372246 MMP26Q9NRE1 261 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 DUSP22Q9NRW4 184 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 SLC2A8Q9NY64 477 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 DEC1Q9P2X7 70 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 MUC3AQ02505 3323 aa4.83□□□□□ -1.64
ATG4A-204ENST00000372246 MYO9BQ13459 2157 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 A0A0A6YYD4 124 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 LOC107986453A0A1B0GWG9 222 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 A0A1W2PQU0 124 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 URADA6NGE7 173 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 FAM157AC9JC47 383 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 RAB27BO00194 218 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 UBE2CO00762 179 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 PPIHO43447 177 aaKnown RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 XRCC2O43543 280 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 RAMP1O60894 148 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 GPR75O95800 540 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TACSTD2P09758 323 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 CT45A8P0DMV1 189 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 CT45A9P0DMV2 189 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 RNH1P13489 461 aaKnown RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 BCKDHBP21953 392 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 IGFBP4P22692 258 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 MAPK3P27361 379 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TACR3P29371 465 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TLX1P31314 330 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 PPICP45877 212 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 SUPT4H1P63272 117 aaKnown RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 HTRA3P83110 453 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF345Q14585 488 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 MAJINQ3KP22 176 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 SP6Q3SY56 376 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 CT45A2Q5DJT8 189 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TSPO2Q5TGU0 170 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 FIGLAQ6QHK4 219 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 CLEC18BQ6UXF7 455 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 C5orf24Q7Z6I8 188 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 BCORP1Q8N888 145 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 LRRC75AQ8NAA5 344 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM229BQ8NBD8 167 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 C16orf52Q8NHV5 167 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 FLVCR1-AS1Q8TAF5 88 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 ERGIC1Q969X5 290 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 LRFN5Q96NI6 719 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 EDEM2Q9BV94 578 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 EIF5A2Q9GZV4 153 aaKnown RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 DUSP15Q9H1R2 295 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 OR51M1Q9H341 326 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 C5orf66Q9H5L9 145 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 SEC61A2Q9H9S3 476 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 SEBOXQ9HB31 216 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TAF9BQ9HBM6 251 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 MMP25Q9NPA2 562 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM100Q9NV29 134 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TAS2R8Q9NYW2 309 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 COA3Q9Y2R0 106 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 LRP12Q9Y561 859 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 PUS1Q9Y606 427 aaKnown RBP eCLIP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TEX13DA0A0J9YY54 714 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 EDDM13A0A1B0GTR0 161 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 NXPH3O95157 252 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 DIRAS3O95661 229 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 FGF19O95750 216 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 IFNA4P05014 189 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 FCGR3AP08637 254 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 KLK2P20151 261 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 COL8A1P27658 744 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 ARRB1P49407 418 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 PPM1FP49593 454 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 CAV2P51636 162 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 ACTBP60709 375 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 RPS4XP62701 263 aaKnown RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 ACTG1P63261 375 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 CCL20P78556 96 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 C1orf61Q13536 156 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 SLC17A1Q14916 467 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 ZNF239Q16600 458 aaKnown RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM52BQ4KMG9 183 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 MIDNQ504T8 468 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 ACTBL2Q562R1 376 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 FAM166AQ6J272 317 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 UQCC3Q6UW78 93 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TMEM184AQ6ZMB5 413 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 MED25Q71SY5 747 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 BATF2Q8N1L9 274 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 CA13Q8N1Q1 262 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 RAB42Q8N4Z0 105 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 SLC30A7Q8NEW0 376 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 OR10H5Q8NGA6 315 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 SLAMF9Q96A28 289 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 ADAT3Q96EY9 351 aaPredicted RBP4.82□□□□□ -1.64
ATG4A-204ENST00000372246 GPHA2Q96T91 129 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 NUDT22Q9BRQ3 303 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 G6PC3Q9BUM1 346 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 ABHD6Q9BV23 337 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 EMC6Q9BV81 110 aa4.82□□□□□ -1.64
ATG4A-204ENST00000372246 TEX101Q9BY14 249 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms