RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 GPR75O95800 540 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 DANCRP0C864 163 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 DDTP30046 118 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 APOBEC1P41238 236 aaKnown RBP10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 TMEM50BP56557 158 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 SP3Q02447 781 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 AGBL4Q5VU57 503 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 PRO1933Q9H354 126 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 UMAD1C9J7I0 102 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 CST4P01036 141 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 BGLAPP02818 100 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 COX5BP10606 129 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 RAB6AP20340 208 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 GLRA1P23415 457 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 CRABP1P29762 137 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 HOXA6P31267 233 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 TMEM33P57088 247 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 SLC26A5P58743 744 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 GATSQ8NAP1 163 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 OR10D4PQ8NGN7 298 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 TERB2Q8NHR7 220 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 CDV3Q9UKY7 258 aaKnown RBP10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 TMEM184BQ9Y519 407 aaPredicted RBP10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 FRYLO94915 3013 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 A0A1W2PP11 408 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 CXCL10P02778 98 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 ADH1AP07327 375 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 CTLA4P16410 223 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 PPP1CCP36873 323 aaKnown RBP10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 CEACAM6P40199 344 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 CHRDL2Q6WN34 429 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 RNF44Q7L0R7 432 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 CA13Q8N1Q1 262 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 DNAJB11Q9UBS4 358 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 TBC1D29Q9UFV1 150 aa10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 RCL1Q9Y2P8 373 aaKnown RBP10.36□□□□□ -0.75
SMARCA1-201ENST00000371121 ARHGEF17Q96PE2 2063 aaPredicted RBP10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 H7C1Q1 480 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 RAB5CP51148 216 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 KIAA0141Q14154 515 aaPredicted RBP10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 ELAVL3Q14576 367 aaKnown RBP10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 CYB5R2Q6BCY4 276 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 JAGN1Q8N5M9 183 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 CPNE4Q96A23 557 aaPredicted RBP10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 ADAT3Q96EY9 351 aaPredicted RBP10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 RBM14Q96PK6 669 aaKnown RBP10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 FOXQ1Q9C009 403 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 Q9N2J8 555 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 STARD5Q9NSY2 213 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 M0R036 132 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 GUSBP08236 651 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 FAM3AP98173 230 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 RHEBQ15382 184 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 PDZD11Q5EBL8 140 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 ZNF529Q6P280 563 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 SSX9Q7RTT3 188 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 DEFB128Q7Z7B8 93 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 FAM160A2Q8N612 972 aaPredicted RBP10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 ZNF519Q8TB69 540 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 C2orf88Q9BSF0 95 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 ABHD6Q9BV23 337 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 SMIM3Q9BZL3 60 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 ZBP1Q9H171 429 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 OSGIN2Q9Y236 505 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 LRP4O75096 1905 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 TGIF2-C20orf24A0A0A6YYL0 155 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 METTL21EPA6NDL7 271 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 SOCS1O15524 211 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 NUDT21O43809 227 aaKnown RBP10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 PTGER4P35408 488 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 NDUFA6P56556 154 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 RPS15AP62244 130 aaKnown RBP10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 ZP2Q05996 745 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 C2orf50Q96LR7 162 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 KXD1Q9BQD3 176 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 GAR1Q9NY12 217 aaKnown RBP10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 GRHPRQ9UBQ7 328 aa10.35□□□□□ -0.75
SMARCA1-201ENST00000371121 LOC107986453A0A1B0GWG9 222 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 TMEM14DPA8MWL7 114 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 DEDDO75618 318 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 CMPK1P30085 196 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 GDI1P31150 447 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 SPCS3P61009 180 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 BCORP1Q8N888 145 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 RAB7BQ96AH8 199 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 LPAR5Q9H1C0 372 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 LYRM4Q9HD34 91 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 GTF2A1LQ9UNN4 478 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 EMC9Q9Y3B6 208 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 PRUNE2Q8WUY3 3088 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 IGKV1D-43A0A0B4J1Z2 117 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 SERINC4A6NH21 518 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 SEC14L6B5MCN3 397 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 ISG15P05161 165 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 OR13C7P0DN81 318 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 ZNF84P51523 738 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 TGIF2LXQ8IUE1 241 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 FOXRED2Q8IWF2 684 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 UBAC2Q8NBM4 344 aa10.34□□□□□ -0.75
SMARCA1-201ENST00000371121 OR4K15Q8NH41 348 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms