RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 TANC2Q9HCD6 1990 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 A0A096LNT2 108 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 CCDC160A6NGH7 325 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 RGS10O43665 173 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 FADS2O95864 444 aaKnown RBP12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 MT-ND2P03891 347 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 MT-ND5P03915 603 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 COL8A2P25067 703 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 PDLIM4P50479 330 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 FOXB2Q5VYV0 432 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 KCTD18Q6PI47 426 aaPredicted RBP12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 PGAP1Q75T13 922 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 MRPL21Q7Z2W9 205 aaKnown RBP12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 CYSLTR2Q9NS75 346 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 CGGBP1Q9UFW8 167 aaPredicted RBP12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 PSORS1C1Q9UIG5 152 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 TMEM14AQ9Y6G1 99 aa12.82□□□□□ -0.36
SMPDL3A-201ENST00000368440 IQCF6A8MYZ5 107 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 ZNF670-ZNF695F2Z2N8 137 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 RBMXP38159 391 aaKnown RBP12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 MTNR1AP48039 350 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 DSCR9P59020 149 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 PSMA6P60900 246 aaKnown RBP12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 ROM1Q03395 351 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 POU4F2Q12837 409 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 TMED1Q13445 227 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 PCGF3Q3KNV8 242 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 MEDAGQ5VYS4 303 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 ZNF322Q6U7Q0 402 aaPredicted RBP12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 PLEKHG7Q6ZR37 379 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 ZNF679Q8IYX0 411 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 STX19Q8N4C7 294 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 OR8G5Q8NG78 346 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 ASB17Q8WXJ9 295 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 RNFT2Q96EX2 444 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 C18orf12Q96KH6 178 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 Q96MT0 163 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 SMR3AQ99954 134 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 REPIN1Q9BWE0 567 aaKnown RBP12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 REG4Q9BYZ8 158 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 DUSP21Q9H596 190 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 NKIRAS2Q9NYR9 191 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 IKZF2Q9UKS7 526 aa12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.81□□□□□ -0.36
SMPDL3A-201ENST00000368440 A0A1W2PQL4 384 aaPredicted RBP12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 VWC2LB2RUY7 222 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 H0YL77 283 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 CDC14BO60729 498 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 ADH4P08319 380 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 CSF3P09919 207 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 C21orf33P30042 268 aaPredicted RBP12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 LIPAP38571 399 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 ZNF91Q05481 1191 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 GFOD2Q3B7J2 385 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 OR2Z1Q8NG97 314 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 OR10H4Q8NGA5 316 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 OR10AD1Q8NGE0 317 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 SPSB4Q96A44 273 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 SGK3Q96BR1 496 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 PGAM5Q96HS1 289 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 MNTQ99583 582 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 MROQ9BYG7 248 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 VCX3AQ9NNX9 186 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 MYOZ1Q9NP98 299 aaPredicted RBP12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 MRM2Q9UI43 246 aaKnown RBP12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 CACNG2Q9Y698 323 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 ACANP16112 2415 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 ZANQ9Y493 2812 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 LOC390937A0A1W2PQ73 354 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 TRIM64CA6NLI5 447 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 MLNRO43193 412 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 TPD52L2O43399 206 aaKnown RBP12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 XRCC2O43543 280 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 APOC1P02654 83 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 ATP6V1E1P36543 226 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 CSNK2BP67870 215 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 MFGE8Q08431 387 aaPredicted RBP12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 ST3GAL4Q11206 333 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 ZMAT1Q5H9K5 638 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 FAM209AQ5JX71 171 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 DEGS2Q6QHC5 323 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 OR8B12Q8NGG6 310 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 ELMOD3Q96FG2 381 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 REEP6Q96HR9 211 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 SLC30A2Q9BRI3 323 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 BPESC1Q9GZL8 116 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 NIPAL2Q9H841 368 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 SAP30LQ9HAJ7 183 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 DECR2Q9NUI1 292 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 PLCXD1Q9NUJ7 323 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 FAM206AQ9NX38 181 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 ZDHHC8Q9ULC8 765 aa12.8□□□□□ -0.36
SMPDL3A-201ENST00000368440 CD300LBA8K4G0 201 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 J3QRE1 110 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 PHYHO14832 338 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 SRSF10O75494 262 aaKnown RBP12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 RP2O75695 350 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 CD55P08174 381 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 INHBBP09529 407 aa12.79□□□□□ -0.36
SMPDL3A-201ENST00000368440 OR2T7P0C7T2 308 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms