RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 CAPZA1P52907 286 aa15.99■□□□□ 0.15
UBQLN4-201ENST00000368309 SLC25A42Q86VD7 318 aa15.99■□□□□ 0.15
UBQLN4-201ENST00000368309 JSRP1Q96MG2 331 aaPredicted RBP15.99■□□□□ 0.15
UBQLN4-201ENST00000368309 GPER1Q99527 375 aa15.99■□□□□ 0.15
UBQLN4-201ENST00000368309 PNRC2Q9NPJ4 139 aaKnown RBP15.99■□□□□ 0.15
UBQLN4-201ENST00000368309 ZBTB25P24278 435 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 MRPL14Q6P1L8 145 aaKnown RBP15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 GALNT11Q8NCW6 608 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 ZNF416Q9BWM5 594 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 WDR13Q9H1Z4 485 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 NCOA6Q14686 2063 aaPredicted RBP15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 B8ZZF3 427 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 TUSC1Q2TAM9 212 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 PLAC9Q5JTB6 97 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 OR6K3Q8NGY3 331 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 MYOZ1Q9NP98 299 aaPredicted RBP15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 KCNAB3O43448 404 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 DKK1O94907 266 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 M6PRP20645 277 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 ATP1B3P54709 279 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 FAM74A1Q5RGS3 127 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 LYG2Q86SG7 212 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 GLRX5Q86SX6 157 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 NAXDQ8IW45 347 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 ELP5Q8TE02 316 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 PPP1R1CQ8WVI7 109 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 LIN37Q96GY3 246 aaPredicted RBP15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 FN3KRPQ9HA64 309 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 PISDQ9UG56 409 aa15.98■□□□□ 0.15
UBQLN4-201ENST00000368309 C9orf170A2RU37 121 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 TMPPEQ6ZT21 453 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 SLC51BQ86UW2 128 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 OR4K15Q8NH41 348 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 ZNF775Q96BV0 537 aaPredicted RBP15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 SLC2A8Q9NY64 477 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 AQP7P3A6NL99 342 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 F5H5K5 113 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 CASRP41180 1078 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 LRRC18Q8N456 261 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 MARCH1Q8TCQ1 289 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 COMMD9Q9P000 198 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 PFDN2Q9UHV9 154 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 WDPCPO95876 746 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 CFIP05156 583 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 PCOLCEQ15113 449 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 PHYHD1Q5SRE7 291 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 FADS6Q8N9I5 356 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 ADPRHL1Q8NDY3 354 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 OR5M9Q8NGP3 310 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 RAB3CQ96E17 227 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 C1orf147Q96MC9 270 aaPredicted RBP15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 GAREM1Q9H706 876 aa15.97■□□□□ 0.15
UBQLN4-201ENST00000368309 EEF1E1-BLOC1S5C9J1V9 151 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 TP53I11O14683 189 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 CRTAPO75718 401 aaPredicted RBP15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 CD8AP01732 235 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 TMEM50BP56557 158 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 EDAQ92838 391 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 GPN3Q9UHW5 284 aaPredicted RBP15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 HDGFL3Q9Y3E1 203 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 IGKV1-9A0A0C4DH69 117 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 CALCRP30988 508 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 SLC6A9P48067 706 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 HIST3H3Q16695 136 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 PDZD9Q8IXQ8 264 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 OR1S1Q8NH92 325 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 ZNF385AQ96PM9 386 aaKnown RBP15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 UCN2Q96RP3 112 aa15.96■□□□□ 0.15
UBQLN4-201ENST00000368309 CDC14BO60729 498 aa15.96■□□□□ 0.14
UBQLN4-201ENST00000368309 CCL3P10147 92 aa15.96■□□□□ 0.14
UBQLN4-201ENST00000368309 EIF1P41567 113 aaKnown RBP15.96■□□□□ 0.14
UBQLN4-201ENST00000368309 C11orf87Q6NUJ2 197 aa15.96■□□□□ 0.14
UBQLN4-201ENST00000368309 HDDC2Q7Z4H3 204 aa15.96■□□□□ 0.14
UBQLN4-201ENST00000368309 IFI44Q8TCB0 444 aa15.96■□□□□ 0.14
UBQLN4-201ENST00000368309 MR1Q95460 341 aa15.96■□□□□ 0.14
UBQLN4-201ENST00000368309 SLC26A1Q9H2B4 701 aa15.96■□□□□ 0.14
UBQLN4-201ENST00000368309 MOB1AQ9H8S9 216 aa15.96■□□□□ 0.14
UBQLN4-201ENST00000368309 PTRH2Q9Y3E5 179 aaKnown RBP15.96■□□□□ 0.14
UBQLN4-201ENST00000368309 EFSO43281 561 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 RAD51DO75771 328 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 CCL4P13236 92 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 SLC35A1P78382 337 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 MICBQ29980 383 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 RAET1LQ5VY80 246 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 C1QL2Q7Z5L3 287 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 DTX1Q86Y01 620 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 TMEM59Q9BXS4 323 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 ARID1AO14497 2285 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 C13orf42A0A1B0GVH6 325 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 HOXD11P31277 338 aaPredicted RBP15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 FGL1Q08830 312 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 DTWD2Q8NBA8 298 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 SLC25A43Q8WUT9 341 aaPredicted RBP15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 MITD1Q8WV92 249 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 ST8SIA2Q92186 375 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 PGAM5Q96HS1 289 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 ARHGAP5-AS1Q96IT6 56 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 ZNF75AQ96N20 296 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 PHB2Q99623 299 aa15.95■□□□□ 0.14
UBQLN4-201ENST00000368309 VRK1Q99986 396 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms