RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 SPCS2Q15005 226 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 C16orf54Q6UWD8 224 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 ZFAND4Q86XD8 727 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 GLB1L2Q8IW92 636 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 TFAP2CQ92754 450 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 PLEKHJ1Q9NW61 149 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 ONECUT1Q9UBC0 465 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 CHRNA9Q9UGM1 479 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 CTDSP2O14595 271 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 GPR37O15354 613 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 SCGB1A1P11684 91 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 MEOX1P50221 254 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 RHOBP62745 196 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 HBG1P69891 147 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 HBG2P69892 147 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 ZNF415Q09FC8 603 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 GPR50Q13585 617 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 TMUB2Q71RG4 321 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 LMNTD1Q8N9Z9 388 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 MS4A10Q96PG2 267 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 NPAS1Q99742 590 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 VN1R3Q9BXE9 311 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 ANKRD10Q9NXR5 420 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 RHBDD3Q9Y3P4 386 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 EP300Q09472 2414 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-206ENST00000367253 FAM221AA4D161 298 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 CEBPZOSA8MTT3 80 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 G3V3Y1 287 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 WDR1O75083 606 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 PDGFBP01127 241 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-206ENST00000367253 PVRP15151 417 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 MMP11P24347 488 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 UBE2IP63279 158 aaKnown RBP7.85□□□□□ -1.15
SYNE1-206ENST00000367253 BAXQ07812 192 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 GPR18Q14330 331 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 TBCEQ15813 527 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-206ENST00000367253 OR2G6Q5TZ20 316 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 PMS2CLQ68D20 193 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 RNASEKQ6P5S7 137 aaKnown RBP7.85□□□□□ -1.15
SYNE1-206ENST00000367253 TMPRSS11FQ6ZWK6 438 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 PIGCQ92535 297 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 SCNM1Q9BWG6 230 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 MRPL13Q9BYD1 178 aaKnown RBP7.85□□□□□ -1.15
SYNE1-206ENST00000367253 SLC52A3Q9NQ40 469 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 SLC2A8Q9NY64 477 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 CNOT2Q9NZN8 540 aaKnown RBP7.85□□□□□ -1.15
SYNE1-206ENST00000367253 THYN1Q9P016 225 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 V9GY05 133 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 MROH6A6NGR9 719 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 MCRIP1C9JLW8 97 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 HCRTR1O43613 425 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 NSA2O95478 260 aaKnown RBP7.85□□□□□ -1.15
SYNE1-206ENST00000367253 FBXO45P0C2W1 286 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 ELK1P19419 428 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 HLA-DMAP28067 261 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 PSMB3P49720 205 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 RAB1AP62820 205 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 RELBQ01201 579 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 ZC3H3Q8IXZ2 948 aaKnown RBP7.85□□□□□ -1.15
SYNE1-206ENST00000367253 OR8I2Q8N0Y5 310 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 PIK3IP1Q96FE7 263 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 DERL1Q9BUN8 251 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 JAM3Q9BX67 310 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 NRSN2Q9GZP1 204 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 CACFD1Q9UGQ2 172 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 OSGIN1Q9UJX0 560 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 TRAPPC2LQ9UL33 140 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 ENPP4Q9Y6X5 453 aa7.85□□□□□ -1.15
SYNE1-206ENST00000367253 MEIS3P1A6NDR6 274 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 MBPP02686 304 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-206ENST00000367253 GBAP04062 536 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 GABRB3P28472 473 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 ID1P41134 155 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 PRDX1Q06830 199 aaKnown RBP7.84□□□□□ -1.15
SYNE1-206ENST00000367253 OXA1LQ15070 435 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 TMEM107Q6UX40 140 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 OR2T27Q8NH04 317 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 HRASLSQ9HDD0 168 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 ADAM29Q9UKF5 820 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 OARD1Q9Y530 152 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 NCOR1O75376 2440 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 PTGESO14684 152 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 UNGP13051 313 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-206ENST00000367253 ECI1P42126 302 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 GPR4P46093 362 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 EMX1Q04741 257 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-206ENST00000367253 BAMBIQ13145 260 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 SLC25A35Q3KQZ1 300 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 LDLRAD2Q5SZI1 272 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 TMEM244Q5VVB8 128 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 FBXW12Q6X9E4 464 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 MUC20Q8N307 709 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-206ENST00000367253 TFAP2BQ92481 460 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 KTI12Q96EK9 354 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-206ENST00000367253 SLC2A6Q9UGQ3 507 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 GPR52Q9Y2T5 361 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 PRR19A6NJB7 356 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 EDIL3O43854 480 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 HPP00738 406 aa7.84□□□□□ -1.15
SYNE1-206ENST00000367253 TFAP2AP05549 437 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms