RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 NDRG3Q9UGV2 375 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 GBF1Q92538 1859 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 OTOL1A6NHN0 477 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 LIMS3P0CW19 117 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 LIMS4P0CW20 117 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 PCMT1P22061 227 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 MFSD4AQ8N468 514 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 ZADH2Q8N4Q0 377 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 ANKRD53Q8N9V6 530 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 KDF1Q8NAX2 398 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 SLCO1B1Q9Y6L6 691 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 ALG1L2C9J202 215 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 SOX15O60248 233 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 RPL12P30050 165 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 SRP9P49458 86 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 ENDOGQ14249 297 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 NUPL2O15504 423 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 PGA3P0DJD8 388 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 ZP3P21754 424 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 GABRA2P47869 451 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 SCGB2A2Q13296 93 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 C8orf82Q6P1X6 216 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 NOXO1Q8NFA2 376 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 PRSS44E7EML9 344 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 IFI6P09912 130 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 NOVA1P51513 510 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 SERTAD4Q9NUC0 356 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 CTSFQ9UBX1 484 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 Q6ZRG5 221 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 HSD17B8Q92506 261 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 ZNF845Q96IR2 970 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 MTFP1Q9UDX5 166 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 SLC23A1Q9UHI7 598 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 FIGNL2A6NMB9 653 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 ZGLP1P0C6A0 271 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 PAQR6Q6TCH4 344 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 PRR14Q9BWN1 585 aa10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 GDF2Q9UK05 429 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-203ENST00000366766 RAD52P43351 418 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 KIRREL2Q6UWL6 708 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 WBP2Q969T9 261 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 ZMAT3Q9HA38 289 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 TERTO14746 1132 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 CTDSPLO15194 276 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 OR10A3P58181 314 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 SURF2Q15527 256 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 PHLDA2Q53GA4 152 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 ZDHHC23Q8IYP9 409 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 OR51E1Q8TCB6 317 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 OR8G1Q15617 311 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 RBMXL3Q8N7X1 1067 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 ZC3HAV1LQ96H79 300 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 REEP6Q96HR9 211 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 TWSG1Q9GZX9 223 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 RNF167Q9H6Y7 350 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 UCK1Q9HA47 277 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 DECR2Q9NUI1 292 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 SIP14410 1827 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 OR2C1O95371 312 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 PLA1AQ53H76 456 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 OR4C16Q8NGL9 310 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 OR10Z1Q8NGY1 313 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 SARAFQ96BY9 339 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 NTNG2Q96CW9 530 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 CXorf58Q96LI9 332 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 ZNF2Q9BSG1 426 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 CALHM2Q9HA72 323 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 EIF3IQ13347 325 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 ALG14Q96F25 216 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 SIGLEC11Q96RL6 698 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 PURGQ9UJV8 347 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 SSUH2Q9Y2M2 353 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 FPR2P25090 351 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 SOWAHCQ53LP3 525 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 SIRT6Q8N6T7 355 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 TMED3Q9Y3Q3 217 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 RNF4P78317 190 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 RNPS1Q15287 305 aaKnown RBP10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 NKG7Q16617 165 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 S1PR3Q99500 378 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 RAB18Q9NP72 206 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 TRBV5-3A0A0A0MS03 114 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 TRAT1Q6PIZ9 186 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 SLC16A12Q6ZSM3 486 aa10.87□□□□□ -0.67
CDC42BPA-203ENST00000366766 MDH2P40926 338 aaKnown RBP10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 ELF4Q99607 663 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 PLA2G12AQ9BZM1 189 aa10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 ROS1P08922 2347 aa10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 IGFBP1P08833 259 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 PXNP49023 591 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 GPNMBQ14956 572 aa10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 ACOT6Q3I5F7 207 aaPredicted RBP10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 DUSP18Q8NEJ0 188 aa10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 CMTM2Q8TAZ6 248 aa10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 DHRS9Q9BPW9 319 aa10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 ADAM19Q9H013 955 aa10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 MYO7BQ6PIF6 2116 aa10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 SLC2A10O95528 541 aa10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 EXOSC2Q13868 293 aaKnown RBP10.86□□□□□ -0.67
CDC42BPA-203ENST00000366766 RAB35Q15286 201 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms