RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 CENPKQ9BS16 269 aa1.42□□□□□ -2.18
RNU6-553P-201ENST00000364047 RWDD2AQ9UIY3 292 aa1.42□□□□□ -2.18
RNU6-553P-201ENST00000364047 MCTS1Q9ULC4 181 aaKnown RBP1.42□□□□□ -2.18
RNU6-553P-201ENST00000364047 HES2Q9Y543 173 aa1.42□□□□□ -2.18
RNU6-553P-201ENST00000364047 A6NDN8 102 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 GOLGA6L4A6NEF3 574 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 FSTL3O95633 263 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 RRM2P31350 389 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 BMI1P35226 326 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 ACOT2P49753 483 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 TRAM2Q15035 370 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 FAM131AQ6UXB0 335 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 CD300LGQ6UXG3 332 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 LINC00469Q8N7U9 141 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 LY6G5BQ8NDX9 201 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 OR56B2PQ8NGI1 322 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 OR52N1Q8NH53 320 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 ENKURQ8TC29 256 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 RERGQ96A58 199 aaPredicted RBP1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 OR4K3Q96R72 315 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 DUSP21Q9H596 190 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 METTL7AQ9H8H3 244 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 RRAGDQ9NQL2 400 aaPredicted RBP1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 DYRK4Q9NR20 520 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 SLC39A1Q9NY26 324 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 HMGXB4Q9UGU5 601 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 COMMD3-BMI1R4GMX3 469 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 MUC6Q6W4X9 2439 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 RPRD2Q5VT52 1461 aaKnown RBP1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 NACADO15069 1562 aa1.41□□□□□ -2.18
RNU6-553P-201ENST00000364047 CENPBD1B2RD01 187 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 NDUFAB1O14561 156 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 DNALI1O14645 258 aaPredicted RBP1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 NELFEP18615 380 aaKnown RBP1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 OR1E1P30953 314 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 IFITM3Q01628 133 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 SLC9A3R2Q15599 337 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 AMMECR1LQ6DCA0 310 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 C22orf42Q6IC83 251 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 UBAC2Q8NBM4 344 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 OR7G2Q8NG99 324 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 OR4A4PQ8NGN8 299 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 ACMSDQ8TDX5 336 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 ZNF442Q9H7R0 627 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 RETNQ9HD89 108 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 ZNF302Q9NR11 478 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 RGS18Q9NS28 235 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 MTCH1Q9NZJ7 389 aa1.4□□□□□ -2.19
RNU6-553P-201ENST00000364047 SDHAF1A6NFY7 115 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 A8MWL6 223 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 RAD1O60671 282 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 TGM6O95932 706 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 HPRT1P00492 218 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 MMP7P09237 267 aaPredicted RBP1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 TROVE2P10155 538 aaKnown RBP eCLIP1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 CTRB1P17538 263 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 TGM4P49221 684 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 RAB7AP51149 207 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 ZNF121P58317 390 aaPredicted RBP1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 RAB10P61026 200 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 SELENBP1Q13228 472 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 MRPL23Q16540 153 aaKnown RBP1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 ZNF829Q3KNS6 432 aaPredicted RBP1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 HSP90AB3PQ58FF7 597 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 CPTPQ5TA50 214 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 TMPRSS11AQ6ZMR5 421 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 Q6ZS52 159 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 DRAM1Q8N682 238 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 GPATCH11Q8N954 259 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 OR13C2Q8NGS9 318 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 OR5K2Q8NHB8 316 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 LYPD6BQ8NI32 183 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 SLC2A14Q8TDB8 520 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 CDS1Q92903 461 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 FBXO32Q969P5 355 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 TMEM38AQ9H6F2 299 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 NLE1Q9NVX2 485 aaPredicted RBP1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 DCAF16Q9NXF7 216 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 TRIP11Q15643 1979 aa1.39□□□□□ -2.19
RNU6-553P-201ENST00000364047 IGLV10-54A0A075B6I4 117 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 SMCO3A2RU48 225 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 M0R1X1 148 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 AP3B1O00203 1094 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 GABRPO00591 440 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 FGFR1OPO95684 399 aaKnown RBP1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 MPIP34949 423 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 PCK1P35558 622 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 FUSP35637 526 aaKnown RBP eCLIP1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 NAB1Q13506 487 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 ZNF141Q15928 474 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 ZNF470Q6ECI4 717 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 Q6ZSR6 202 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 ORMDL3Q8N138 153 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 BPIFCQ8NFQ6 507 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 IGF2BP2-AS1Q96M15 143 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 PDCD1LG2Q9BQ51 273 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 PIGUQ9H490 435 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 CLN8Q9UBY8 286 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 SLC17A4Q9Y2C5 497 aa1.38□□□□□ -2.19
RNU6-553P-201ENST00000364047 TICRRQ7Z2Z1 1910 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms