RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 HHLA2Q9UM44 414 aa16.97■□□□□ 0.31
CMTM3-201ENST00000361909 GTF2A1LQ9UNN4 478 aa16.97■□□□□ 0.31
CMTM3-201ENST00000361909 MEMO1Q9Y316 297 aa16.97■□□□□ 0.31
CMTM3-201ENST00000361909 C4orf47A7E2U8 309 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 RAB27BO00194 218 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 TXNL1O43396 289 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 LRP3O75074 770 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 SFT2D2O95562 160 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 ACKR3P25106 362 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 EPHA8P29322 1005 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-201ENST00000361909 HRH1P35367 487 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 DNASE1L1P49184 302 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 RAB1AP62820 205 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 RPL18Q07020 188 aaKnown RBP16.96■□□□□ 0.31
CMTM3-201ENST00000361909 ARRDC1Q8N5I2 433 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 TMEM52Q8NDY8 209 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 VSTM2LQ96N03 204 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 AMELYQ99218 206 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 LPAR4Q99677 370 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 PPP4R1LQ9P1A2 415 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 SCN2AQ99250 2005 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-201ENST00000361909 A0A1W2PPE3 182 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 FITM1A5D6W6 292 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 MSGN1A6NI15 193 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 IFNA17P01571 189 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 ISG15P05161 165 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 AWAT1Q58HT5 328 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 OR2B11Q5JQS5 317 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 HIST2H3AQ71DI3 136 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 JAGN1Q8N5M9 183 aa16.96■□□□□ 0.31
CMTM3-201ENST00000361909 CGGBP1Q9UFW8 167 aaPredicted RBP16.96■□□□□ 0.31
CMTM3-201ENST00000361909 IGHV1OR21-1A0A087WYE8 117 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 C7orf77A4D0Y5 90 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 ZNF860A6NHJ4 632 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 FOXS1O43638 330 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 BPNT1O95861 308 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 PLGP00747 810 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-201ENST00000361909 HTR5AP47898 357 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 VAX1Q5SQQ9 334 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 TMEM268Q5VZI3 342 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 LRRC69Q6ZNQ3 347 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 LYPD6Q86Y78 171 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 CA13Q8N1Q1 262 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 ARHGEF39Q8N4T4 335 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 NUBPLQ8TB37 319 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 ANKRD9Q96BM1 317 aaPredicted RBP16.95■□□□□ 0.3
CMTM3-201ENST00000361909 SGK3Q96BR1 496 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 C2orf50Q96LR7 162 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 MOGAT1Q96PD6 335 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 MESP1Q9BRJ9 268 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 RGCCQ9H4X1 137 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 FBLN5Q9UBX5 448 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 ANAPC10Q9UM13 185 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 SLC22A13Q9Y226 551 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 FLVCR1Q9Y5Y0 555 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 PI4KAP42356 2102 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 H3BSH0 61 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 PPIHO43447 177 aaKnown RBP16.95■□□□□ 0.3
CMTM3-201ENST00000361909 JTBO76095 146 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 PNLIPP16233 465 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 S1PR1P21453 382 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 RAB38P57729 211 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 PRTGQ2VWP7 1150 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 DNLZQ5SXM8 178 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 ACBD4Q8NC06 268 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 OR1J1Q8NGS3 322 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 RAB3CQ96E17 227 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 AKR1E2Q96JD6 320 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 TOLLIPQ9H0E2 274 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 ZMAT3Q9HA38 289 aaKnown RBP16.95■□□□□ 0.3
CMTM3-201ENST00000361909 OR2S2Q9NQN1 319 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 CUTCQ9NTM9 273 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 STARD10Q9Y365 291 aa16.95■□□□□ 0.3
CMTM3-201ENST00000361909 LOC100509620A0A075B734 347 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 KCNAB3O43448 404 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 HKR1P10072 659 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 EIF2B1Q14232 305 aaKnown RBP16.94■□□□□ 0.3
CMTM3-201ENST00000361909 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.94■□□□□ 0.3
CMTM3-201ENST00000361909 PLXDC1Q8IUK5 500 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 OR13C3Q8NGS6 347 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 TERB2Q8NHR7 220 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 ZNF563Q8TA94 476 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 TGM7Q96PF1 710 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 CAPN10Q9HC96 672 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 OR5AC2Q9NZP5 309 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 SDK1Q7Z5N4 2213 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 A6NLC8 198 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 H7C1C5 153 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 XKRYO14609 159 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 HCRTR1O43613 425 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 DUX1O43812 170 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 PNPP00491 289 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 F13BP05160 661 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 NME2P22392 152 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 GABRA4P48169 554 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 UCP2P55851 309 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 LCN6P62502 163 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 OR4N2Q8NGD1 307 aa16.94■□□□□ 0.3
CMTM3-201ENST00000361909 SAP25Q8TEE9 199 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms