RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 CLEC3BP05452 202 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 CASP3P42574 277 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 CATSPERDQ86XM0 798 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 OR2AK2Q8NG84 335 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 FAM212BQ9NTI7 297 aaPredicted RBP16.68■□□□□ 0.26
CLIP2-202ENST00000361545 SMIM18P0DKX4 95 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 PI3P19957 117 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 CNR1P21554 472 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 RBMS3Q6XE24 437 aaKnown RBP16.68■□□□□ 0.26
CLIP2-202ENST00000361545 D2HGDHQ8N465 521 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 GPR32P1Q8NGA4 272 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 OTOSQ8NHW6 89 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 ARPC5LQ9BPX5 153 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 FLVCR1Q9Y5Y0 555 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 CABIN1Q9Y6J0 2220 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 SMLR1H3BR10 107 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 RER1O15258 196 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 IGHV4-34P06331 123 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 GALNSP34059 522 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 ZNF626Q68DY1 528 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 GABRA4P48169 554 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 RAB13P51153 203 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 SMIM21Q3B7S5 101 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 FAM27D1Q5T7N8 215 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 FAAP20Q6NZ36 180 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 GABRG1Q8N1C3 465 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 PCNPQ8WW12 178 aaKnown RBP16.68■□□□□ 0.26
CLIP2-202ENST00000361545 UHRF2Q96PU4 802 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 S1PR3Q99500 378 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 GPR87Q9BY21 358 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 RNF150Q9ULK6 438 aa16.68■□□□□ 0.26
CLIP2-202ENST00000361545 IMPA2O14732 288 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 MGMTP16455 207 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 TMPRSS11FQ6ZWK6 438 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 CMTM4Q8IZR5 234 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 APOBEC4Q8WW27 367 aaKnown RBP16.67■□□□□ 0.26
CLIP2-202ENST00000361545 SCPEP1Q9HB40 452 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 HSPB2A8KAH6 182 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 HSPB2Q16082 182 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 OR2T2Q6IF00 324 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 RASL10BQ96S79 203 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 OPCMLQ14982 345 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 SIAEQ9HAT2 523 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 HPP00738 406 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 PPP3CBP16298 524 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 SRD5A2P31213 254 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 RAC1P63000 192 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 MC2RQ01718 297 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 LYSMD2Q8IV50 215 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 OR1S2Q8NGQ3 325 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 IL20Q9NYY1 176 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 CASP8AP2Q9UKL3 1982 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 CROCCQ5TZA2 2017 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 CDC14BO60729 498 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 RPS16P62249 146 aaKnown RBP16.67■□□□□ 0.26
CLIP2-202ENST00000361545 TMEM200AQ86VY9 491 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 MRPS24Q96EL2 167 aaKnown RBP16.67■□□□□ 0.26
CLIP2-202ENST00000361545 PTDSS2Q9BVG9 487 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 NTN4Q9HB63 628 aa16.67■□□□□ 0.26
CLIP2-202ENST00000361545 H3BMH7 237 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 AQP7O14520 342 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 AVPR2P30518 371 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 TESK1Q15569 626 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 OSR2Q8N2R0 312 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 NEU3Q9UQ49 428 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 HLA-HP01893 362 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 FCGR2CP31995 323 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 C3AR1Q16581 482 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 OR8B4Q96RC9 309 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 ADAT1Q9BUB4 502 aaKnown RBP16.66■□□□□ 0.26
CLIP2-202ENST00000361545 ZNF768Q9H5H4 540 aaKnown RBP16.66■□□□□ 0.26
CLIP2-202ENST00000361545 SIRT5Q9NXA8 310 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 A3GALT2U3KPV4 340 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 DNAJC13O75165 2243 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 OR5H15A6NDH6 313 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 DUSP1P28562 367 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 NKX2-1P43699 371 aaPredicted RBP16.66■□□□□ 0.26
CLIP2-202ENST00000361545 ZNF774Q6NX45 483 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 PLPPR2Q96GM1 343 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 PLK3Q9H4B4 646 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 FGF20Q9NP95 211 aaPredicted RBP16.66■□□□□ 0.26
CLIP2-202ENST00000361545 C1orf196B1AJZ1 125 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 GMDSO60547 372 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 CCL2P13500 99 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 PPT1P50897 306 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 FUT6P51993 359 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 IL34Q6ZMJ4 242 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 UBAC2Q8NBM4 344 aa16.66■□□□□ 0.26
CLIP2-202ENST00000361545 PATE4P0C8F1 98 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 TNFRSF1AP19438 455 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 TLE4Q04727 773 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 RTL8BQ17RB0 113 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 TERTO14746 1132 aaKnown RBP16.65■□□□□ 0.26
CLIP2-202ENST00000361545 TGM6O95932 706 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 RAB35Q15286 201 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 TOMM34Q15785 309 aaPredicted RBP16.65■□□□□ 0.26
CLIP2-202ENST00000361545 PMS2CLQ68D20 193 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 ST8SIA4Q92187 359 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 ZNF32P17041 273 aa16.65■□□□□ 0.26
CLIP2-202ENST00000361545 BAMBIQ13145 260 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms