RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 PRR18Q8N4B5 295 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 OR4C3Q8NH37 302 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 IL1F10Q8WWZ1 152 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 FGF13Q92913 245 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 FAHD2AQ96GK7 314 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 LIN37Q96GY3 246 aaPredicted RBP14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 CACNA1IQ9P0X4 2223 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 OR4C45A6NMZ5 311 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 FPR2P25090 351 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 MFAP5Q13361 173 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 PABPC1L2AQ5JQF8 200 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 AGBL4Q5VU57 503 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 H1FNTQ75WM6 255 aaPredicted RBP14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 GRINAQ7Z429 371 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 CA13Q8N1Q1 262 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 SLC38A9Q8NBW4 561 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 NPEPL1Q8NDH3 523 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 SOSTQ9BQB4 213 aa14.39□□□□□ -0.11
CLSTN1-201ENST00000361311 LILRB3O75022 631 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 MBP02144 154 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 OR5H8P0DN80 308 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 ADRA2CP18825 462 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 GSK3AP49840 483 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 HBG1P69891 147 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 HBG2P69892 147 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 PLP2Q04941 152 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 LCN15Q6UWW0 184 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 SLC25A42Q86VD7 318 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 GPX8Q8TED1 209 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 RAB33BQ9H082 229 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 AMDHD2Q9Y303 409 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 SEC14L6B5MCN3 397 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 PPP2CBP62714 309 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 PPP2CAP67775 309 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 Q3ZCU0 254 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 RTN4IP1Q8WWV3 396 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 SDSLQ96GA7 329 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 WWTR1Q9GZV5 400 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 GPR84Q9NQS5 396 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 A0A087X0M5 115 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 A0A1B0GX30 115 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 MED19A0JLT2 244 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 FAM221BA6H8Z2 402 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 EIF3GO75821 320 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 PIGPP57054 158 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 DOK3Q7L591 496 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 PIGCQ92535 297 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 ZBP1Q9H171 429 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 SCN3AQ9NY46 2000 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 EIF4E2O60573 245 aaKnown RBP14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 CA3P07451 260 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 HOXC8P31273 242 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 BTG2P78543 158 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 HTD2P86397 168 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 ZNF429Q86V71 674 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 LRRC18Q8N456 261 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 NECAP1Q8NC96 275 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 KTI12Q96EK9 354 aaPredicted RBP14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 MRPL22Q9NWU5 206 aaKnown RBP14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 FLRT3Q9NZU0 649 aa14.38□□□□□ -0.11
CLSTN1-201ENST00000361311 MFNGO00587 321 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 OLFM2O95897 454 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 GLRA1P23415 457 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 NANOS3P60323 173 aaKnown RBP14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 PCK2Q16822 640 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 PRTGQ2VWP7 1150 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 CST9LP1Q5W188 147 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 ARHGEF39Q8N4T4 335 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 PLK3Q9H4B4 646 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 THAP10Q9P2Z0 257 aaPredicted RBP14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 RP1L1Q8IWN7 2480 aaPredicted RBP14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 COL11A1P12107 1806 aaPredicted RBP14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 A8MXE2 369 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 DMRTC1Q5HYR2 192 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 PLCXD3Q63HM9 321 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 FIP1L1Q6UN15 594 aaKnown RBP14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 TMEM18Q96B42 140 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 HHIPQ96QV1 700 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 PBOV1Q9GZY1 135 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 OR51M1Q9H341 326 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 ENY2Q9NPA8 101 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 CHRNA9Q9UGM1 479 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 A0A1W2PPV4 95 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 KCNAB3O43448 404 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 HLA-HP01893 362 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 SULT1A1P50225 295 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 HSD17B7P56937 341 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 FAM78AQ5JUQ0 283 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 MOB3CQ70IA8 216 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 BTF3L4Q96K17 158 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 NMES1Q9C002 83 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 TIMM8BQ9Y5J9 83 aaPredicted RBP14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 MUC1P15941 1255 aaPredicted RBP14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 RSC1A1Q92681 617 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 WSB1Q9Y6I7 421 aa14.37□□□□□ -0.11
CLSTN1-201ENST00000361311 A0A1W2PPE2 198 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 FIGNL2A6NMB9 653 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 TMEM33P57088 247 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 DUSP2Q05923 314 aa14.36□□□□□ -0.11
CLSTN1-201ENST00000361311 CLEC12BQ2HXU8 276 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms