RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 RAI1Q7Z5J4 1906 aaPredicted RBP21.78■■□□□ 1.08
SSBP3-202ENST00000357475 A0A0U1RQV5 110 aa21.78■■□□□ 1.08
SSBP3-202ENST00000357475 J3QW42 95 aa21.78■■□□□ 1.08
SSBP3-202ENST00000357475 CTAG2O75638 210 aa21.78■■□□□ 1.08
SSBP3-202ENST00000357475 LIPAP38571 399 aa21.78■■□□□ 1.08
SSBP3-202ENST00000357475 TAS2R43P59537 309 aa21.78■■□□□ 1.08
SSBP3-202ENST00000357475 ADIPOQQ15848 244 aa21.78■■□□□ 1.08
SSBP3-202ENST00000357475 COMMD2Q86X83 199 aa21.78■■□□□ 1.08
SSBP3-202ENST00000357475 ZNF676Q8N7Q3 588 aa21.78■■□□□ 1.08
SSBP3-202ENST00000357475 OR5L1Q8NGL2 311 aa21.78■■□□□ 1.08
SSBP3-202ENST00000357475 ISYNA1Q9NPH2 558 aa21.78■■□□□ 1.08
SSBP3-202ENST00000357475 CISD1Q9NZ45 108 aaKnown RBP21.78■■□□□ 1.08
SSBP3-202ENST00000357475 FBN2P35556 2912 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 hCG_38984A0A1B0GV85 526 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 LOC107986453A0A1B0GWG9 222 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 XRCC2O43543 280 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 PLPP2O43688 288 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 CPEP16870 476 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 FAM3AP98173 230 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 MALLQ13021 153 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 PSG7Q13046 419 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 TPBGQ13641 420 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 HAVCR2Q8TDQ0 301 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 SYT3Q9BQG1 590 aa21.77■■□□□ 1.08
SSBP3-202ENST00000357475 REPIN1Q9BWE0 567 aaKnown RBP21.77■■□□□ 1.08
SSBP3-202ENST00000357475 LILRA1O75019 489 aa21.76■■□□□ 1.07
SSBP3-202ENST00000357475 SYT6Q5T7P8 510 aaPredicted RBP21.76■■□□□ 1.07
SSBP3-202ENST00000357475 OR2T2Q6IF00 324 aa21.76■■□□□ 1.07
SSBP3-202ENST00000357475 FBXW12Q6X9E4 464 aa21.76■■□□□ 1.07
SSBP3-202ENST00000357475 PGAP1Q75T13 922 aa21.76■■□□□ 1.07
SSBP3-202ENST00000357475 MRPL21Q7Z2W9 205 aaKnown RBP21.76■■□□□ 1.07
SSBP3-202ENST00000357475 PHC2Q8IXK0 858 aa21.76■■□□□ 1.07
SSBP3-202ENST00000357475 UFD1Q92890 307 aa21.76■■□□□ 1.07
SSBP3-202ENST00000357475 MRPL37Q9BZE1 423 aaKnown RBP21.76■■□□□ 1.07
SSBP3-202ENST00000357475 ZNF442Q9H7R0 627 aa21.76■■□□□ 1.07
SSBP3-202ENST00000357475 TMEM212A6NML5 194 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 ISG15P05161 165 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 TFAP2AP05549 437 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 OR4A8P0C604 315 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 UBCP0CG48 685 aaKnown RBP21.75■■□□□ 1.07
SSBP3-202ENST00000357475 JUNBP17275 347 aaPredicted RBP21.75■■□□□ 1.07
SSBP3-202ENST00000357475 ACKR3P25106 362 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 RPS11P62280 158 aaKnown RBP eCLIP21.75■■□□□ 1.07
SSBP3-202ENST00000357475 INSL4Q14641 139 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 UNQ6126/PRO20091Q6UXV3 157 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 TMIGD2Q96BF3 282 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 DUSP13Q9UII6 198 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 A6NIN4 97 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 ZNF250P15622 560 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 CCL1P22362 96 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 GSK3AP49840 483 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 RPS23P62266 143 aaKnown RBP21.75■■□□□ 1.07
SSBP3-202ENST00000357475 RPS25P62851 125 aaKnown RBP21.75■■□□□ 1.07
SSBP3-202ENST00000357475 ZNF718Q3SXZ3 478 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 MBNL2Q5VZF2 373 aaKnown RBP21.75■■□□□ 1.07
SSBP3-202ENST00000357475 ZNF787Q6DD87 383 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 ZNF544Q6NX49 715 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 PLPP7Q8NBV4 271 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 BHLHE23Q8NDY6 225 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 SYNPRQ8TBG9 265 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 TMEM203Q969S6 136 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 MRPL24Q96A35 216 aaKnown RBP21.75■■□□□ 1.07
SSBP3-202ENST00000357475 TMED9Q9BVK6 235 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 SF3B6Q9Y3B4 125 aaKnown RBP21.75■■□□□ 1.07
SSBP3-202ENST00000357475 CMAHPQ9Y471 501 aa21.75■■□□□ 1.07
SSBP3-202ENST00000357475 NBPF19A0A087WUL8 3843 aa21.74■■□□□ 1.07
SSBP3-202ENST00000357475 SYT7O43581 403 aa21.74■■□□□ 1.07
SSBP3-202ENST00000357475 TMEM244Q5VVB8 128 aa21.74■■□□□ 1.07
SSBP3-202ENST00000357475 OR5AS1Q8N127 324 aa21.74■■□□□ 1.07
SSBP3-202ENST00000357475 OR56B2PQ8NGI1 322 aa21.74■■□□□ 1.07
SSBP3-202ENST00000357475 HAVCR1Q96D42 359 aa21.74■■□□□ 1.07
SSBP3-202ENST00000357475 COMMD4Q9H0A8 199 aa21.74■■□□□ 1.07
SSBP3-202ENST00000357475 CLEC4MQ9H2X3 399 aaPredicted RBP21.74■■□□□ 1.07
SSBP3-202ENST00000357475 RGCCQ9H4X1 137 aa21.74■■□□□ 1.07
SSBP3-202ENST00000357475 PPP1R3EQ9H7J1 279 aa21.74■■□□□ 1.07
SSBP3-202ENST00000357475 ZNF281Q9Y2X9 895 aa21.74■■□□□ 1.07
SSBP3-202ENST00000357475 A0A1B0GVI7 797 aa21.73■■□□□ 1.07
SSBP3-202ENST00000357475 ACHEP22303 614 aa21.73■■□□□ 1.07
SSBP3-202ENST00000357475 OR14K1Q8NGZ2 314 aa21.73■■□□□ 1.07
SSBP3-202ENST00000357475 GTF3AQ92664 365 aaKnown RBP21.73■■□□□ 1.07
SSBP3-202ENST00000357475 DHRS9Q9BPW9 319 aa21.73■■□□□ 1.07
SSBP3-202ENST00000357475 UBTD1Q9HAC8 227 aa21.73■■□□□ 1.07
SSBP3-202ENST00000357475 VCX3AQ9NNX9 186 aa21.73■■□□□ 1.07
SSBP3-202ENST00000357475 PURGQ9UJV8 347 aaKnown RBP21.73■■□□□ 1.07
SSBP3-202ENST00000357475 CENPEQ02224 2701 aa21.72■■□□□ 1.07
SSBP3-202ENST00000357475 HS3ST1O14792 307 aa21.72■■□□□ 1.07
SSBP3-202ENST00000357475 RAC2P15153 192 aa21.72■■□□□ 1.07
SSBP3-202ENST00000357475 GCH1P30793 250 aa21.72■■□□□ 1.07
SSBP3-202ENST00000357475 TGFBR2P37173 567 aa21.72■■□□□ 1.07
SSBP3-202ENST00000357475 TLE4Q04727 773 aa21.72■■□□□ 1.07
SSBP3-202ENST00000357475 OR8B8Q15620 311 aa21.72■■□□□ 1.07
SSBP3-202ENST00000357475 C1orf174Q8IYL3 243 aa21.72■■□□□ 1.07
SSBP3-202ENST00000357475 V9GYS6 101 aa21.72■■□□□ 1.07
SSBP3-202ENST00000357475 IGLV3-9A0A075B6K5 115 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 GGT3PA6NGU5 568 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 CD300LBA8K4G0 201 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 GOSR1O95249 250 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 CD1AP06126 327 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 TUBG1P23258 451 aa21.71■■□□□ 1.07
SSBP3-202ENST00000357475 APOBEC3AP31941 199 aaPredicted RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms