RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 ARR3P36575 388 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 RUNX2Q13950 521 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 ADGRG3Q86Y34 549 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 ZDHHC22Q8N966 263 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 SCCPDHQ8NBX0 429 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 MVB12AQ96EY5 273 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 MYEOVQ96EZ4 313 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 MRGPRX4Q96LA9 322 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 SUMO1P63165 101 aaKnown RBP13.42□□□□□ -0.26
CHD4-201ENST00000357008 VPS25Q9BRG1 176 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 FAM103A1Q9BTL3 118 aaKnown RBP13.42□□□□□ -0.26
CHD4-201ENST00000357008 MAGT1Q9H0U3 335 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 CBY1Q9Y3M2 126 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 OR51B4Q9Y5P0 310 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 NRG2O14511 850 aaPredicted RBP13.42□□□□□ -0.26
CHD4-201ENST00000357008 CSF2RBP32927 897 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 RAB35Q15286 201 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 ELFN2Q5R3F8 820 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 GPR32P1Q8NGA4 272 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 CXorf58Q96LI9 332 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 GDF2Q9UK05 429 aaPredicted RBP13.42□□□□□ -0.26
CHD4-201ENST00000357008 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.42□□□□□ -0.26
CHD4-201ENST00000357008 NQO2P16083 231 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 AVPR2P30518 371 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 DMWDQ09019 674 aa13.42□□□□□ -0.26
CHD4-201ENST00000357008 YRDCQ86U90 279 aaKnown RBP13.42□□□□□ -0.26
CHD4-201ENST00000357008 RGPD5Q99666 1765 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 CSN1S1P47710 185 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 KCNAB1Q14722 419 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 TOMM34Q15785 309 aaPredicted RBP13.41□□□□□ -0.26
CHD4-201ENST00000357008 VWA2Q5GFL6 755 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 OR8B4Q96RC9 309 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 CACFD1Q9UGQ2 172 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 LAMP3Q9UQV4 416 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 FRG2CA6NGY1 282 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 PHOX2AO14813 284 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 PLPP2O43688 288 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 OR2J2O76002 312 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 PCBP4P57723 403 aaKnown RBP13.41□□□□□ -0.26
CHD4-201ENST00000357008 RANP62826 216 aaKnown RBP13.41□□□□□ -0.26
CHD4-201ENST00000357008 ST3GAL2Q16842 350 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 TMPRSS11FQ6ZWK6 438 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 OR4S1Q8NGB4 309 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 OR8D4Q8NGM9 314 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 ST3GAL6Q9Y274 331 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 SLC38A6Q8IZM9 456 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 KLHDC1Q8N7A1 406 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 PATE1Q8WXA2 126 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 CMBLQ96DG6 245 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 TINAGL1Q9GZM7 467 aaPredicted RBP13.41□□□□□ -0.26
CHD4-201ENST00000357008 MMP26Q9NRE1 261 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 RCL1Q9Y2P8 373 aaKnown RBP13.41□□□□□ -0.26
CHD4-201ENST00000357008 SIRPB1O00241 398 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 CST4P01036 141 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 CLEC3BP05452 202 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 LIMS3P0CW19 117 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 LIMS4P0CW20 117 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 KCNJ3P48549 501 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 OTOSQ8NHW6 89 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 NUDT9Q9BW91 350 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 ZNF320A2RRD8 509 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 CNIH1O95406 144 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 TMEM11P17152 192 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 FZD2Q14332 565 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 HLXQ14774 488 aaPredicted RBP13.41□□□□□ -0.26
CHD4-201ENST00000357008 MSRB3Q8IXL7 192 aa13.41□□□□□ -0.26
CHD4-201ENST00000357008 MRPS2Q9Y399 296 aaKnown RBP13.41□□□□□ -0.26
CHD4-201ENST00000357008 LAMA4Q16363 1823 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 WNT1P04628 370 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 ZNF121P58317 390 aaPredicted RBP13.4□□□□□ -0.26
CHD4-201ENST00000357008 FAM53BQ14153 422 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 MLF2Q15773 248 aaPredicted RBP13.4□□□□□ -0.26
CHD4-201ENST00000357008 OR2B11Q5JQS5 317 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 GPR119Q8TDV5 335 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 TWSG1Q9GZX9 223 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 ZDHHC11Q9H8X9 412 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 CACNA1SQ13698 1873 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 ABCD4O14678 606 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 LGALS4P56470 323 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 SSX1Q16384 188 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 FXNQ16595 210 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 PLA1AQ53H76 456 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 RPL7L1Q6DKI1 246 aaKnown RBP13.4□□□□□ -0.26
CHD4-201ENST00000357008 RNF165Q6ZSG1 346 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 OSR2Q8N2R0 312 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 ELSPBP1Q96BH3 223 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 FAM122AQ96E09 287 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 C6orf106Q9H6K1 298 aaPredicted RBP13.4□□□□□ -0.26
CHD4-201ENST00000357008 J3QR89 54 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 GUK1Q16774 197 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 ZNF574Q6ZN55 896 aaPredicted RBP13.4□□□□□ -0.26
CHD4-201ENST00000357008 LRRTM1Q86UE6 522 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 SPICQ8N5J4 248 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 NT5CQ8TCD5 201 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 MARVELD1Q9BSK0 173 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 A0A087WUJ7 227 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 NDUFB7P17568 137 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 ZNF528Q3MIS6 628 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 PRRX2Q99811 253 aa13.4□□□□□ -0.26
CHD4-201ENST00000357008 CHRDL1Q9BU40 450 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms