RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 NXF5Q9H1B4 397 aaKnown RBP8.39□□□□□ -1.07
SMG6-202ENST00000354901 PTGES2Q9H7Z7 377 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 RNF122Q9H9V4 155 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 GRHPRQ9UBQ7 328 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 CD207Q9UJ71 328 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 TRAV8-7A0A075B6U6 113 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 CTDSPLO15194 276 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 TSPAN15O95858 294 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 PRH1P02810 166 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 FOLR2P14207 255 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 ADRA2CP18825 462 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 DRD1P21728 446 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 GPR3P46089 330 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 CDX1P47902 265 aaPredicted RBP8.39□□□□□ -1.07
SMG6-202ENST00000354901 NUTF2P61970 127 aaKnown RBP8.39□□□□□ -1.07
SMG6-202ENST00000354901 FZD2Q14332 565 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 ZNF141Q15928 474 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 ZNF239Q16600 458 aaKnown RBP8.39□□□□□ -1.07
SMG6-202ENST00000354901 ARHGAP40Q5TG30 622 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 ZNF813Q6ZN06 617 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 TSLPQ969D9 159 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 TMEM106AQ96A25 262 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 LPAR4Q99677 370 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 CBLN4Q9NTU7 201 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 FRRS1LQ9P0K9 344 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 MRM2Q9UI43 246 aaKnown RBP8.39□□□□□ -1.07
SMG6-202ENST00000354901 GOLT1BQ9Y3E0 138 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 KIR2DS5A0A0G2JLQ3 304 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 A0A0G2JNG1 304 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 SMCO3A2RU48 225 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 KIR2DS3K7RE56 304 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 HCRTR2O43614 444 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 WISP1O95388 367 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 IGHV4-34P06331 123 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 CD14P08571 375 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 NPSP0C0P6 89 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 DPP4P27487 766 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 TACR3P29371 465 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 PRSS3P35030 304 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 RABIFP47224 123 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 CAV2P51636 162 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 YPEL5P62699 121 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 TNFRSF9Q07011 255 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 RPL18Q07020 188 aaKnown RBP8.39□□□□□ -1.07
SMG6-202ENST00000354901 KIR2DS5Q14953 304 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 TOMM34Q15785 309 aaPredicted RBP8.39□□□□□ -1.07
SMG6-202ENST00000354901 NKAIN2Q5VXU1 208 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 OR6N1Q8NGY5 312 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 MFSD8Q8NHS3 518 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 PHYHIPLQ96FC7 376 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 AMELYQ99218 206 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 PARPBPQ9NWS1 579 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 LPAR3Q9UBY5 353 aa8.39□□□□□ -1.07
SMG6-202ENST00000354901 FITM1A5D6W6 292 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 ZNF587BE7ETH6 402 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 SCDO00767 359 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 SOD3P08294 240 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 HOXB5P09067 269 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 PI3P19957 117 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 HOXA5P20719 270 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 SERPINF1P36955 418 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 CSNK1EP49674 416 aaKnown RBP8.38□□□□□ -1.07
SMG6-202ENST00000354901 PRPS1P60891 318 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 RAP1AP62834 184 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 NR0B2Q15466 257 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 SLC9A3R2Q15599 337 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 ZNF74Q16587 644 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 OR2T2Q6IF00 324 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 KDM8Q8N371 416 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 LRRC18Q8N456 261 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 TSEN15Q8WW01 171 aaKnown RBP8.38□□□□□ -1.07
SMG6-202ENST00000354901 RTN4RQ9BZR6 473 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 UPB1Q9UBR1 384 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 CACFD1Q9UGQ2 172 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 HSPA12AO43301 675 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 CSF1P09603 554 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 HNF1AP20823 631 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 PPP1R1AQ13522 171 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 TMEM244Q5VVB8 128 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 DMRTA1Q5VZB9 504 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 RPL7L1Q6DKI1 246 aaKnown RBP8.38□□□□□ -1.07
SMG6-202ENST00000354901 HPSE2Q8WWQ2 592 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 HAVCR1Q96D42 359 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 TCTN2Q96GX1 697 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 KCNG2Q9UJ96 466 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 CLDN16Q9Y5I7 305 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 SPTY2D1-AS1A0A0U1RR47 76 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 PRAMEF26H0Y7S4 382 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 ARPC3O15145 178 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 GPRIN2O60269 458 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 PMS2P2O95744 297 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 MBPP02686 304 aaPredicted RBP8.38□□□□□ -1.07
SMG6-202ENST00000354901 CD74P04233 296 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 JMJD7P0C870 316 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 CCKBRP32239 447 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 DHPSP49366 369 aaPredicted RBP8.38□□□□□ -1.07
SMG6-202ENST00000354901 CXADRP78310 365 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 GGTLC2Q14390 218 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 MST1LQ2TV78 715 aa8.38□□□□□ -1.07
SMG6-202ENST00000354901 Q499Y3 187 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms