RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 HTR5AP47898 357 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 AMTP48728 403 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PRAMEF9Q5VWM5 478 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TCTN3Q6NUS6 607 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 GRASPQ7Z6J2 395 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 NEIL2Q969S2 332 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 OR1F2PQ96R84 312 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 F2RL3Q96RI0 385 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 C11orf84Q9BUA3 381 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 PELI2Q9HAT8 420 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 HINT3Q9NQE9 182 aaKnown RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 ITGB4P16144 1822 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 UBR2Q8IWV8 1755 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 NCKAP5O14513 1909 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 LOC102724200A0A096LPH7 203 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 A0A1W2PNV4 684 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 MASP2O00187 686 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TNFSF12O43508 249 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 SCGB2A1O75556 95 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 FPR2P25090 351 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 GABRA3P34903 492 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 ZNF85Q03923 595 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PPP1R1AQ13522 171 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 CRMP1Q14194 572 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 SPRYD7Q5W111 196 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 MEX3DQ86XN8 651 aaKnown RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 FAM174AQ8TBP5 190 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 DAZAP1Q96EP5 407 aaKnown RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 WDR92Q96MX6 357 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 CHST5Q9GZS9 411 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 ALPK2Q86TB3 2170 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 STRCQ7RTU9 1775 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 COL2A1P02458 1487 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 ITGB1BP1O14713 200 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 RRP8O43159 456 aaKnown RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 PHF1O43189 567 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 FCMRO60667 390 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 GALR3O60755 368 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 HMGN2P05204 90 aaKnown RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 POU3F2P20265 443 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 ACTR1BP42025 376 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 EGR3Q06889 387 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 KHDC3LQ587J8 217 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TMEM99Q8N816 258 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 RCBTB1Q8NDN9 531 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 ABHD6Q9BV23 337 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 GCM1Q9NP62 436 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 GDE1Q9NZC3 331 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 MRPS17Q9Y2R5 130 aaKnown RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 WASHC3Q9Y3C0 194 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 NPTNQ9Y639 398 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TEX50A0A1B0GTY4 177 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 DIRC3C9JPN6 131 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 OR8G3PP0DMU2 310 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PMCHP20382 165 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 CLRN1P58418 232 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 JMJD6Q6NYC1 403 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 VITQ6UXI7 678 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 CDRT4Q8N9R6 151 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 OR52L2PQ8NGH6 319 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 IFI44Q8TCB0 444 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TMEM234Q8WY98 164 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 PGAM5Q96HS1 289 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 BMFQ96LC9 184 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 DGAT2Q96PD7 388 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 LMF2Q9BU23 707 aaKnown RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 NPDC1Q9NQX5 325 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 TBC1D3DA0A087WVF3 549 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TBC1D3IA0A087WXS9 549 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 HEPACAM2A8MVW5 462 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TBC1D3LB9A6J9 549 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 GSTP1P09211 210 aaKnown RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 MRPS6P82932 125 aaKnown RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 TBC1D3CQ6IPX1 549 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 FBXO46Q6PJ61 603 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 DEGS2Q6QHC5 323 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TMEM184AQ6ZMB5 413 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 SLC25A42Q86VD7 318 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 TBC1D3Q8IZP1 549 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 ZBTB34Q8NCN2 500 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 ASB11Q8WXH4 323 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 OR8B4Q96RC9 309 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 WNT5BQ9H1J7 359 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 OR10A2Q9H208 303 aa4.58□□□□□ -1.68
SKP1-202ENST00000353411 KLF2Q9Y5W3 355 aaPredicted RBP4.58□□□□□ -1.68
SKP1-202ENST00000353411 BCORQ6W2J9 1755 aa4.57□□□□□ -1.68
SKP1-202ENST00000353411 TMEM265A0A087WTH1 108 aa4.57□□□□□ -1.68
SKP1-202ENST00000353411 A0A1W2PQ45 241 aaPredicted RBP4.57□□□□□ -1.68
SKP1-202ENST00000353411 A0A1W2PQY0 241 aa4.57□□□□□ -1.68
SKP1-202ENST00000353411 ANTXRLA6NF34 631 aa4.57□□□□□ -1.68
SKP1-202ENST00000353411 M0R2Z0 102 aa4.57□□□□□ -1.68
SKP1-202ENST00000353411 SOX1O00570 391 aaPredicted RBP4.57□□□□□ -1.68
SKP1-202ENST00000353411 MT-ATP6P00846 226 aa4.57□□□□□ -1.68
SKP1-202ENST00000353411 IGHA1P01876 353 aa4.57□□□□□ -1.68
SKP1-202ENST00000353411 TMEM225BP0DP42 221 aa4.57□□□□□ -1.68
SKP1-202ENST00000353411 RPS18P62269 152 aaKnown RBP4.57□□□□□ -1.68
SKP1-202ENST00000353411 BSXQ3C1V8 233 aa4.57□□□□□ -1.68
SKP1-202ENST00000353411 RPL7L1Q6DKI1 246 aaKnown RBP4.57□□□□□ -1.68
SKP1-202ENST00000353411 ZNF547Q8IVP9 402 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms