RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 TMEM104Q8NE00 496 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 TSTD1Q8NFU3 115 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 TERB2Q8NHR7 220 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 TMEM230Q96A57 120 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 SLC39A1Q9NY26 324 aa21.74■■□□□ 1.07
CPNE1-202ENST00000352393 MRPS28Q9Y2Q9 187 aaKnown RBP21.74■■□□□ 1.07
CPNE1-202ENST00000352393 C13orf42A0A1B0GVH6 325 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 ETV2O00321 342 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-202ENST00000352393 ADCYAP1P18509 176 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 TMEM128Q5BJH2 165 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 TMPPEQ6ZT21 453 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 APCDD1LQ8NCL9 501 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 CDC6Q99741 560 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 METTL12A8MUP2 240 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 HIST1H1DP16402 221 aaKnown RBP21.73■■□□□ 1.07
CPNE1-202ENST00000352393 BCKDHBP21953 392 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 HNRNPKP61978 463 aaKnown RBP eCLIP21.73■■□□□ 1.07
CPNE1-202ENST00000352393 CYCSP99999 105 aaKnown RBP21.73■■□□□ 1.07
CPNE1-202ENST00000352393 FLI1Q01543 452 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-202ENST00000352393 ACTBL2Q562R1 376 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 GLIPR1L1Q6UWM5 242 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 ARRDC1Q8N5I2 433 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 RRNAD1Q96FB5 475 aaKnown RBP21.73■■□□□ 1.07
CPNE1-202ENST00000352393 SPACA5Q96QH8 159 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 NUDT22Q9BRQ3 303 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 CYTL1Q9NRR1 136 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 SEMA5BQ9P283 1151 aa21.73■■□□□ 1.07
CPNE1-202ENST00000352393 RPH3AQ9Y2J0 694 aaPredicted RBP21.73■■□□□ 1.07
CPNE1-202ENST00000352393 VSTM2BA6NLU5 285 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 SHISA8B8ZZ34 492 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 ZNF878C9JN71 531 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 H3BML4 177 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 H2AFB1P0C5Y9 115 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 CD79AP11912 226 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 TMPRSS9Q7Z410 1059 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 NAA40Q86UY6 237 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 PLXDC1Q8IUK5 500 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 ARMC10Q8N2F6 343 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 GTPBP8Q8N3Z3 284 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-202ENST00000352393 ZSCAN4Q8NAM6 433 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-202ENST00000352393 RNF138Q8WVD3 245 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 TSNAXQ99598 290 aaKnown RBP21.72■■□□□ 1.07
CPNE1-202ENST00000352393 CHRDQ9H2X0 955 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 C5orf66Q9H5L9 145 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 ATXN7L1Q9ULK2 861 aaPredicted RBP21.72■■□□□ 1.07
CPNE1-202ENST00000352393 GPR132Q9UNW8 380 aa21.72■■□□□ 1.07
CPNE1-202ENST00000352393 H0YIZ8 118 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 GPR31O00270 319 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 SIGLEC6O43699 453 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 EFNA2O43921 213 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 CDC14BO60729 498 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 ABOP16442 354 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 THEM4Q5T1C6 240 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 BAP18Q8IXM2 172 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 PUSL1Q8N0Z8 303 aaKnown RBP21.71■■□□□ 1.07
CPNE1-202ENST00000352393 RAB3CQ96E17 227 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 SLC22A11Q9NSA0 550 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 SRPK3Q9UPE1 567 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 PRELID3BQ9Y3B1 194 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 ASXL3Q9C0F0 2248 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 SOCS1O15524 211 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 DUX1O43812 170 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 MPIG6BO95866 241 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 ACTL6AO96019 429 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 OR3A4PP47883 348 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 NOXO1Q8NFA2 376 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 ZNF501Q96CX3 271 aaPredicted RBP21.71■■□□□ 1.07
CPNE1-202ENST00000352393 MESP1Q9BRJ9 268 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 SOX7Q9BT81 388 aa21.71■■□□□ 1.07
CPNE1-202ENST00000352393 A0A0B4J2A0 478 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 SFT2D2O95562 160 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 SVBPQ8N300 66 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 NFAM1Q8NET5 270 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-202ENST00000352393 OR8B12Q8NGG6 310 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 KCNG3Q8TAE7 436 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 SHPKQ9UHJ6 478 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 RAD51DO75771 328 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 LYL1P12980 280 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 NXPH1P58417 271 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 PEG10Q86TG7 708 aaKnown RBP21.7■■□□□ 1.06
CPNE1-202ENST00000352393 PAQR8Q8TEZ7 354 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 THAP3Q8WTV1 239 aaPredicted RBP21.7■■□□□ 1.06
CPNE1-202ENST00000352393 RAB18Q9NP72 206 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 HPF1Q9NWY4 346 aa21.7■■□□□ 1.06
CPNE1-202ENST00000352393 PGA4P0DJD7 388 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 PGA3P0DJD8 388 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 NPY4RP50391 375 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 MYBPHQ13203 477 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 GUCA2BQ16661 112 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 C10orf91Q5T1B1 145 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 PGAP1Q75T13 922 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 ABHD12BQ7Z5M8 362 aaPredicted RBP21.69■■□□□ 1.06
CPNE1-202ENST00000352393 NUBPLQ8TB37 319 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 ROBO4Q8WZ75 1007 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 ARL11Q969Q4 196 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 TMEM41AQ96HV5 264 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 TMEM59Q9BXS4 323 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 POLR1DQ9Y2S0 133 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 FLVCR1Q9Y5Y0 555 aa21.69■■□□□ 1.06
CPNE1-202ENST00000352393 MFNGO00587 321 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms