RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 STK17BO94768 372 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 COX6A1P12074 109 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 HRH1P35367 487 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 CD96P40200 585 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 GLIPR1L1Q6UWM5 242 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 RNF144BQ7Z419 303 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 NICN1Q9BSH3 213 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 ANGPTL4Q9BY76 406 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 GAREM1Q9H706 876 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 D6RAR5 112 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 GSTP1P09211 210 aaKnown RBP19.53■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF133P52736 654 aaPredicted RBP19.53■□□□□ 0.72
UPF3A-201ENST00000351487 EIF3IQ13347 325 aaKnown RBP19.53■□□□□ 0.72
UPF3A-201ENST00000351487 C10orf128Q5T292 105 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 SLC51BQ86UW2 128 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF283Q8N7M2 679 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 KCNG3Q8TAE7 436 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 FAM71F1Q96KD3 344 aaPredicted RBP19.53■□□□□ 0.72
UPF3A-201ENST00000351487 SPACA5Q96QH8 159 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 CST11Q9H112 138 aa19.53■□□□□ 0.72
UPF3A-201ENST00000351487 A0A0A6YYD4 124 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 MFSD2BA6NFX1 497 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 ZSCAN5BA6NJL1 495 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 IGLV3-1P01715 115 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF660Q6AZW8 331 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-201ENST00000351487 LIN54Q6MZP7 749 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 FOXL2NBQ6ZUU3 175 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 FAM57BQ71RH2 274 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 TMEM104Q8NE00 496 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 MITD1Q8WV92 249 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF416Q9BWM5 594 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF224Q9NZL3 707 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 ZNF230Q9UIE0 474 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-201ENST00000351487 KIAA1549Q9HCM3 1950 aa19.52■□□□□ 0.72
UPF3A-201ENST00000351487 OR5H14A6NHG9 310 aa19.52■□□□□ 0.71
UPF3A-201ENST00000351487 KLK3P07288 261 aaPredicted RBP19.52■□□□□ 0.71
UPF3A-201ENST00000351487 OR3A4PP47883 348 aa19.52■□□□□ 0.71
UPF3A-201ENST00000351487 PPP1R1AQ13522 171 aa19.52■□□□□ 0.71
UPF3A-201ENST00000351487 FAM189A2Q15884 450 aa19.52■□□□□ 0.71
UPF3A-201ENST00000351487 OR14K1Q8NGZ2 314 aa19.52■□□□□ 0.71
UPF3A-201ENST00000351487 M1APQ8TC57 530 aa19.52■□□□□ 0.71
UPF3A-201ENST00000351487 SDHAF2Q9NX18 166 aa19.52■□□□□ 0.71
UPF3A-201ENST00000351487 CDC14BO60729 498 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 KLF7O75840 302 aaPredicted RBP19.51■□□□□ 0.71
UPF3A-201ENST00000351487 NAT1P18440 290 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 MSR1P21757 451 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 CSNK1A1P48729 337 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 ZNF345Q14585 488 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 ZNF546Q86UE3 836 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 WDR5BQ86VZ2 330 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 UBALD2Q8IYN6 164 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 TMEM54Q969K7 222 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 NELFAQ9H3P2 528 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 PROK2Q9HC23 129 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 SH2D2AQ9NP31 389 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 TRIOBPQ9H2D6 2365 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 C9orf170A2RU37 121 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 OR2AT4A6NND4 320 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 B8ZZF3 427 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 UBBP0CG47 229 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 CCL3P10147 92 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 SLC25A4P12235 298 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 LIFP15018 202 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 DSCR4P56555 118 aaPredicted RBP19.51■□□□□ 0.71
UPF3A-201ENST00000351487 TRA2AQ13595 282 aaKnown RBP eCLIP19.51■□□□□ 0.711e-9■■■■□ 26.1
UPF3A-201ENST00000351487 RTN4RL2Q86UN3 420 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 NAA40Q86UY6 237 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 PAQR8Q8TEZ7 354 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 CXorf58Q96LI9 332 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 TMEM59Q9BXS4 323 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 PTRH2Q9Y3E5 179 aaKnown RBP19.51■□□□□ 0.71
UPF3A-201ENST00000351487 HS3ST3B1Q9Y662 390 aa19.51■□□□□ 0.71
UPF3A-201ENST00000351487 A0A0D9SG52 128 aa19.5■□□□□ 0.71
UPF3A-201ENST00000351487 NTN3O00634 580 aaPredicted RBP19.5■□□□□ 0.71
UPF3A-201ENST00000351487 EIF1BO60739 113 aaKnown RBP19.5■□□□□ 0.71
UPF3A-201ENST00000351487 VAMP5O95183 116 aa19.5■□□□□ 0.71
UPF3A-201ENST00000351487 MPIG6BO95866 241 aa19.5■□□□□ 0.71
UPF3A-201ENST00000351487 HCKP08631 526 aa19.5■□□□□ 0.71
UPF3A-201ENST00000351487 HIST1H1DP16402 221 aaKnown RBP19.5■□□□□ 0.71
UPF3A-201ENST00000351487 PLAC9Q5JTB6 97 aa19.5■□□□□ 0.71
UPF3A-201ENST00000351487 AGBL5Q8NDL9 886 aa19.5■□□□□ 0.71
UPF3A-201ENST00000351487 OR5M9Q8NGP3 310 aa19.5■□□□□ 0.71
UPF3A-201ENST00000351487 COQ8AQ8NI60 647 aa19.5■□□□□ 0.71
UPF3A-201ENST00000351487 MR1Q95460 341 aa19.5■□□□□ 0.71
UPF3A-201ENST00000351487 RAB3CQ96E17 227 aa19.5■□□□□ 0.71
UPF3A-201ENST00000351487 KCNMB2Q9Y691 235 aa19.5■□□□□ 0.71
UPF3A-201ENST00000351487 IGKV1-9A0A0C4DH69 117 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 LIPCP11150 499 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 MGMTP16455 207 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 C9J4A7 227 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 IFNA6P05013 189 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 CFIP05156 583 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 ZP3P21754 424 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 SSR4P51571 173 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 ENDOGQ14249 297 aaKnown RBP19.49■□□□□ 0.71
UPF3A-201ENST00000351487 SGCAQ16586 387 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 PNLIPRP3Q17RR3 467 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 C11orf87Q6NUJ2 197 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 HOGA1Q86XE5 327 aa19.49■□□□□ 0.71
UPF3A-201ENST00000351487 TMEM41AQ96HV5 264 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms