RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 PYCARD-AS1I3L0S3 204 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 AMY2AP04746 511 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 PMPCAQ10713 525 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 ZNF273Q14593 569 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 TMUB2Q71RG4 321 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 PPP1R32Q7Z5V6 425 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 OR1J2Q8NGS2 313 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 RADILQ96JH8 1075 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 SRXN1Q9BYN0 137 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 TINAGL1Q9GZM7 467 aaPredicted RBP12.29□□□□□ -0.44
TRIM4-201ENST00000349062 CHST6Q9GZX3 395 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 PTTG3PQ9NZH4 202 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 LRFN1Q9P244 771 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 PCDHGA5Q9Y5G8 931 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 NBEAQ8NFP9 2946 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 A0A1W2PPC1 479 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 FAM25EA8MYX2 175 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 MCRIP1C9JLW8 97 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 CELA3AP09093 270 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 PGA4P0DJD7 388 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 PGA3P0DJD8 388 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 LIFP15018 202 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 GNB3P16520 340 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 ZP3P21754 424 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 SUMO3P55854 103 aaPredicted RBP12.29□□□□□ -0.44
TRIM4-201ENST00000349062 SLC35A1P78382 337 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 THEM4Q5T1C6 240 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 AKR7LQ8NHP1 331 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 WNT2BQ93097 391 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 POTEKPQ9BYX7 375 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 PCNX1Q96RV3 2341 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 MUC6Q6W4X9 2439 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 TRBV5-7A0A0A0MS05 114 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 SLC17A2O00624 439 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 ZIC3O60481 467 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 GLSO94925 669 aaPredicted RBP12.29□□□□□ -0.44
TRIM4-201ENST00000349062 RAB40ALP0C0E4 278 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 ACHEP22303 614 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 CDNFQ49AH0 187 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 TMEM244Q5VVB8 128 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 C5orf46Q6UWT4 87 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 ZNF704Q6ZNC4 412 aaPredicted RBP12.29□□□□□ -0.44
TRIM4-201ENST00000349062 OR8B12Q8NGG6 310 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 ABHD3Q8WU67 409 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 RAB40AQ8WXH6 277 aa12.29□□□□□ -0.44
TRIM4-201ENST00000349062 PINLYPA6NC86 204 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 YKT6O15498 198 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 GAAP10253 952 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 FAHP16930 419 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 CARD18P57730 90 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 AP3S2P59780 193 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 C2orf68Q2NKX9 166 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 NHLRC3Q5JS37 347 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 CRLF2Q9HC73 371 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 CYB5R1Q9UHQ9 305 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 CEP295Q9C0D2 2601 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 A0A096LPE4 126 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 A0A1W2PPZ6 126 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 FAM74A7A6NL05 159 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 G3V3Q6 166 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 CYB561P49447 251 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 SNU13P55769 128 aaKnown RBP12.28□□□□□ -0.44
TRIM4-201ENST00000349062 SEC61A1P61619 476 aaKnown RBP12.28□□□□□ -0.44
TRIM4-201ENST00000349062 FAM74A3Q4VXF1 159 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 TMEM164Q5U3C3 297 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 OLFML2AQ68BL7 652 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 GSG1LQ6UXU4 331 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 OR52H1Q8NGJ2 320 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 PHYHIPQ92561 330 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 NICN1Q9BSH3 213 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 MFFQ9GZY8 342 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 WDR54Q9H977 334 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 DEPPQ9NTK1 212 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 MLXQ9UH92 298 aa12.28□□□□□ -0.44
TRIM4-201ENST00000349062 E9PLN8 166 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 TNFSF15O95150 251 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 CCL2P13500 99 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 BDKRB2P30411 391 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 EIF1P41567 113 aaKnown RBP12.27□□□□□ -0.44
TRIM4-201ENST00000349062 ROM1Q03395 351 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 TEX30Q5JUR7 227 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 CDCP2Q5VXM1 449 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 ALKBH2Q6NS38 261 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 FAM219AQ8IW50 185 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 HAVCR2Q8TDQ0 301 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 RNF133Q8WVZ7 376 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 LRRC46Q96FV0 321 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 PRRG4Q9BZD6 226 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 SLC26A1Q9H2B4 701 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 CPAMD8Q8IZJ3 1885 aa12.27□□□□□ -0.44
TRIM4-201ENST00000349062 CRTAPO75718 401 aaPredicted RBP12.27□□□□□ -0.45
TRIM4-201ENST00000349062 ZNF93P35789 620 aaPredicted RBP12.27□□□□□ -0.45
TRIM4-201ENST00000349062 OR3A4PP47883 348 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 RGS19P49795 217 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 PLGLB1Q02325 96 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 CASTOR1Q8WTX7 329 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 DMRTA2Q96SC8 542 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 PROK2Q9HC23 129 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 FBXO4Q9UKT5 387 aa12.27□□□□□ -0.45
TRIM4-201ENST00000349062 MFSD2BA6NFX1 497 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms