RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 FAM234AQ9H0X4 552 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 GHITMQ9H3K2 345 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 PPP1R3EQ9H7J1 279 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 PRDM7Q9NQW5 492 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 GPR37O15354 613 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 IGLV3-25P01717 112 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 HEXAP06865 529 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 ERVS71-1P61550 626 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 PCK2Q16822 640 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 TRIM61Q5EBN2 209 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 ABLIM2Q6H8Q1 611 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 TFAP2EQ6VUC0 442 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 PLXDC1Q8IUK5 500 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 WFDC5Q8TCV5 224 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 PSENENQ9NZ42 101 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 MRPS17Q9Y2R5 130 aaKnown RBP10.95□□□□□ -0.66
COL12A1-202ENST00000345356 A0A1B0GV90 55 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 RBFOX3A6NFN3 312 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 MPPED1O15442 326 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 OPN1MWP04001 364 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 OPN1MW2P0DN77 364 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 OPN1MW3P0DN78 364 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 ZNF92Q03936 586 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 SP6Q3SY56 376 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 FAM3CQ92520 227 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 ATOH1Q92858 354 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-202ENST00000345356 LCORQ96JN0 433 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-202ENST00000345356 NOL4LQ96MY1 436 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-202ENST00000345356 SLC46A2Q9BY10 475 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 IGHA1P01876 353 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 LRP11Q86VZ4 500 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 RGP1Q92546 391 aaPredicted RBP10.95□□□□□ -0.66
COL12A1-202ENST00000345356 SOX7Q9BT81 388 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 HCFC1R1Q9NWW0 138 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 GABRQQ9UN88 632 aa10.95□□□□□ -0.66
COL12A1-202ENST00000345356 CDRT15L2A8MXV6 281 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 ONECUT2O95948 504 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 HOXD4P09016 255 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-202ENST00000345356 ABOP16442 354 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 NTSR1P30989 418 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 RUNX3Q13761 415 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 CEBPEQ15744 281 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 KDF1Q8NAX2 398 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-202ENST00000345356 MS4A4AQ96JQ5 239 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 TMEM30AQ9NV96 361 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 FKBP11Q9NYL4 201 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 HNRNPA1P09651 372 aaKnown RBP eCLIP10.94□□□□□ -0.66
COL12A1-202ENST00000345356 TMEM33P57088 247 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 RGS7BPQ6MZT1 257 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-202ENST00000345356 CD300LDQ6UXZ3 194 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 OR10P1Q8NGE3 313 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 TMPRSS13Q9BYE2 586 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 GPR84Q9NQS5 396 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 NINQ8N4C6 2090 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 CFIP05156 583 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 GLRA1P23415 457 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 SLC37A1P57057 533 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 FAM162BQ5T6X4 162 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 RBMXL3Q8N7X1 1067 aaKnown RBP10.94□□□□□ -0.66
COL12A1-202ENST00000345356 OR52N5Q8NH56 324 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 CMTM2Q8TAZ6 248 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 FAM122AQ96E09 287 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 HHIPQ96QV1 700 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 EMC6Q9BV81 110 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 TMEM9BQ9NQ34 198 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 GPANK1O95872 356 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 CRHP06850 196 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 IRF2P14316 349 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 RABIFP47224 123 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 COL19A1Q14993 1142 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 PRTGQ2VWP7 1150 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 SLC35G3Q8N808 338 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 OR52N4Q8NGI2 321 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 ADIPOR1Q96A54 375 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 MSL2Q9HCI7 577 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 SLCO1B1Q9Y6L6 691 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 PLCH1Q4KWH8 1693 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 ABCD4O14678 606 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 CHEK1O14757 476 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 ADAP1O75689 374 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 UBE2V2Q15819 145 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 PNLIPRP3Q17RR3 467 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 ZNF600Q6ZNG1 722 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 H1FNTQ75WM6 255 aaPredicted RBP10.94□□□□□ -0.66
COL12A1-202ENST00000345356 H2BFWTQ7Z2G1 175 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 SLC26A10Q8NG04 563 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 LIPHQ8WWY8 451 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 KCNE3Q9Y6H6 103 aa10.94□□□□□ -0.66
COL12A1-202ENST00000345356 IDSB3KWA1 339 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 FZD6O60353 706 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 YBX1P67809 324 aaKnown RBP10.93□□□□□ -0.66
COL12A1-202ENST00000345356 RAE1P78406 368 aaKnown RBP10.93□□□□□ -0.66
COL12A1-202ENST00000345356 DLK1P80370 383 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 PLGLAQ15195 96 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 C9orf135Q5VTT2 229 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 PLPP6Q8IY26 295 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 MOB1AQ9H8S9 216 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 GNG12Q9UBI6 72 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 KCND3Q9UK17 655 aa10.93□□□□□ -0.66
COL12A1-202ENST00000345356 TERTO14746 1132 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms