RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 ZNF480Q8WV37 535 aa12.4□□□□□ -0.42
TRIO-202ENST00000344204 SLC39A11Q8N1S5 342 aa12.4□□□□□ -0.42
TRIO-202ENST00000344204 GPR137CQ8N3F9 429 aa12.4□□□□□ -0.42
TRIO-202ENST00000344204 DTWD2Q8NBA8 298 aa12.4□□□□□ -0.42
TRIO-202ENST00000344204 FKRPQ9H9S5 495 aa12.4□□□□□ -0.42
TRIO-202ENST00000344204 HPP00738 406 aa12.4□□□□□ -0.43
TRIO-202ENST00000344204 NHLRC3Q5JS37 347 aa12.4□□□□□ -0.43
TRIO-202ENST00000344204 DPPA3Q6W0C5 159 aa12.4□□□□□ -0.43
TRIO-202ENST00000344204 ANGPTL5Q86XS5 388 aa12.4□□□□□ -0.43
TRIO-202ENST00000344204 PLA2G12AQ9BZM1 189 aa12.4□□□□□ -0.43
TRIO-202ENST00000344204 KLF15Q9UIH9 416 aa12.4□□□□□ -0.43
TRIO-202ENST00000344204 OR5K4A6NMS3 321 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 CTSAP10619 480 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 AMDHD1Q96NU7 426 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 SSC5DA1L4H1 1573 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 F13BP05160 661 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 ERVFC1-1P60608 527 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 GUCA2AQ02747 115 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 IKZF1Q13422 519 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 SLC38A9Q8NBW4 561 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 NUDT22Q9BRQ3 303 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 GJE1A6NN92 205 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 AKR7A3O95154 331 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 FCGR2AP12318 317 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 HIST3H3Q16695 136 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 RAB9BQ9NP90 201 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 PLXNB2O15031 1838 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 PRPH2P23942 346 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 RPL7L1Q6DKI1 246 aaKnown RBP12.39□□□□□ -0.43
TRIO-202ENST00000344204 ZNF100Q8IYN0 542 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 VN1R3Q9BXE9 311 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 YIPF1Q9Y548 306 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 MVDP53602 400 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 MMABQ96EY8 250 aaPredicted RBP12.39□□□□□ -0.43
TRIO-202ENST00000344204 A4GNTQ9UNA3 340 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 TSFMP43897 325 aaKnown RBP12.39□□□□□ -0.43
TRIO-202ENST00000344204 MRPL49Q13405 166 aaKnown RBP12.39□□□□□ -0.43
TRIO-202ENST00000344204 MLC1Q15049 377 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 FCN1O00602 326 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 PEX10O60683 326 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 RNGTTO60942 597 aaKnown RBP12.39□□□□□ -0.43
TRIO-202ENST00000344204 TTRP02766 147 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 MTURNQ8N3F0 131 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 ARSGQ96EG1 525 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 TBX15Q96SF7 602 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 AQP7P3A6NL99 342 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 HSBP1O75506 76 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 NDUFB7P17568 137 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 SLCO4C1Q6ZQN7 724 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 OR5B2Q96R09 309 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 CHST11Q9NPF2 352 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 NTNG1Q9Y2I2 539 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 B3GALT4O96024 378 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 WASP42768 502 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 CATSPERDQ86XM0 798 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 PRRX2Q99811 253 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 FOXJ2Q9P0K8 574 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 RCC2Q9P258 522 aaKnown RBP12.39□□□□□ -0.43
TRIO-202ENST00000344204 UQCR10Q9UDW1 63 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 LRP5O75197 1615 aa12.39□□□□□ -0.43
TRIO-202ENST00000344204 DVL1O14640 695 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 TNFRSF10CO14798 259 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 SEC13P55735 322 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 ATP6V1FQ16864 119 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 RGS7BPQ6MZT1 257 aaPredicted RBP12.38□□□□□ -0.43
TRIO-202ENST00000344204 TCTN3Q6NUS6 607 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 NAT8BQ9UHF3 227 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 ZIC2O95409 532 aaPredicted RBP12.38□□□□□ -0.43
TRIO-202ENST00000344204 HPXP02790 462 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 PI3P19957 117 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 S100A7P31151 101 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 PRSS54Q6PEW0 395 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 C17orf78Q8N4C9 275 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 IL22RA1Q8N6P7 574 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 TET1Q8NFU7 2136 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 DIRC3C9JPN6 131 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 TM4SF1P30408 202 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 GABRA4P48169 554 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 EGR3Q06889 387 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 PNLIPRP3Q17RR3 467 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 PLXDC2Q6UX71 529 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 ZNRF4Q8WWF5 429 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 UBL7Q96S82 380 aaPredicted RBP12.38□□□□□ -0.43
TRIO-202ENST00000344204 NXF5Q9H1B4 397 aaKnown RBP12.38□□□□□ -0.43
TRIO-202ENST00000344204 TMEM184BQ9Y519 407 aaPredicted RBP12.38□□□□□ -0.43
TRIO-202ENST00000344204 SDCBPO00560 298 aaPredicted RBP12.38□□□□□ -0.43
TRIO-202ENST00000344204 TUSC2O75896 110 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 PARP11Q9NR21 331 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 IL33O95760 270 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 RPEL1Q2QD12 228 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 ARRDC1Q8N5I2 433 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 OR4N2Q8NGD1 307 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 RTN4IP1Q8WWV3 396 aaPredicted RBP12.38□□□□□ -0.43
TRIO-202ENST00000344204 MR1Q95460 341 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 PEX11GQ96HA9 241 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 TMEM131Q92545 1883 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 A0A0U1RQS6 177 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 LOC102725191A0A1B0GVB3 256 aa12.38□□□□□ -0.43
TRIO-202ENST00000344204 SOX15O60248 233 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms