RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 OR52I1Q8NGK6 324 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 ZNF552Q9H707 407 aaPredicted RBP16.1■□□□□ 0.17
SMAD4-201ENST00000342988 ZNF815PA8K554 130 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 SYT5O00445 386 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 CD14P08571 375 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 CLDN18P56856 261 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 ZNF385BQ569K4 471 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 RTN4IP1Q8WWV3 396 aaPredicted RBP16.1■□□□□ 0.17
SMAD4-201ENST00000342988 NUP188Q5SRE5 1749 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 CEP290O15078 2479 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 AP4M1O00189 453 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 ALX3O95076 343 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 QDPRP09417 244 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 SFTA3P0C7M3 94 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 PAFAH1B2P68402 229 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 APOOQ9BUR5 198 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 TRAPPC4Q9Y296 219 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 DYSFO75923 2080 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 MNX1P50219 401 aaPredicted RBP16.1■□□□□ 0.17
SMAD4-201ENST00000342988 YOD1Q5VVQ6 348 aaPredicted RBP16.1■□□□□ 0.17
SMAD4-201ENST00000342988 VRK2Q86Y07 508 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 C5orf17Q8NAS9 161 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 BEND2Q8NDZ0 799 aa16.1■□□□□ 0.17
SMAD4-201ENST00000342988 A0A1B0GUH1 482 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 BTF3P20290 206 aaKnown RBP16.09■□□□□ 0.17
SMAD4-201ENST00000342988 SRP9P49458 86 aaKnown RBP16.09■□□□□ 0.17
SMAD4-201ENST00000342988 RPS25P62851 125 aaKnown RBP16.09■□□□□ 0.17
SMAD4-201ENST00000342988 ANKRD61A6NGH8 418 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 LRP3O75074 770 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 H1FNTQ75WM6 255 aaPredicted RBP16.09■□□□□ 0.17
SMAD4-201ENST00000342988 IGDCC3Q8IVU1 814 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 FAM71CQ8NEG0 241 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 MISP3Q96FF7 219 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 FAM210BQ96KR6 192 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 PHLPP1O60346 1717 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 SERINC4A6NH21 518 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 ISLRO14498 428 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 FAHP16930 419 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 BSGP35613 385 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 RAB38P57729 211 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 ZNF260Q3ZCT1 412 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 FBXO4Q9UKT5 387 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 ZFP30Q9Y2G7 519 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 DHRS7CA6NNS2 312 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 FRS3O43559 492 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 RPL29P47914 159 aaKnown RBP16.09■□□□□ 0.17
SMAD4-201ENST00000342988 BHLHE23Q8NDY6 225 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 ARRDC2Q8TBH0 407 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 IL21Q9HBE4 155 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 CLEC5AQ9NY25 188 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 PLP1P60201 277 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 CST9Q5W186 159 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 STARD5Q9NSY2 213 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 A0A0A6YYC8 382 aaPredicted RBP16.09■□□□□ 0.17
SMAD4-201ENST00000342988 I3L1I5 382 aaPredicted RBP16.09■□□□□ 0.17
SMAD4-201ENST00000342988 HIST1H1EP10412 219 aaKnown RBP16.09■□□□□ 0.17
SMAD4-201ENST00000342988 PIWIL3Q7Z3Z3 882 aaKnown RBP16.09■□□□□ 0.17
SMAD4-201ENST00000342988 ACPTQ9BZG2 426 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 AKIRIN1Q9H9L7 192 aaPredicted RBP16.09■□□□□ 0.17
SMAD4-201ENST00000342988 PLIN4Q96Q06 1357 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 SPATA31D1Q6ZQQ2 1576 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 TRBV4-1A0A0J9YWV2 114 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 A0A1B0GV72 72 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 OR4C46A6NHA9 309 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 TBXA2RP21731 343 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 ZP3P21754 424 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 MYBPHQ13203 477 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 CEACAM7Q14002 265 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 TOMM34Q15785 309 aaPredicted RBP16.09■□□□□ 0.17
SMAD4-201ENST00000342988 OR6C1Q96RD1 312 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 NOTCH3Q9UM47 2321 aa16.09■□□□□ 0.17
SMAD4-201ENST00000342988 ACHEP22303 614 aa16.08■□□□□ 0.17
SMAD4-201ENST00000342988 TMEM241Q24JQ0 296 aa16.08■□□□□ 0.17
SMAD4-201ENST00000342988 MYPOPQ86VE0 399 aaPredicted RBP16.08■□□□□ 0.17
SMAD4-201ENST00000342988 OR52N1Q8NH53 320 aa16.08■□□□□ 0.17
SMAD4-201ENST00000342988 LAMB4A4D0S4 1761 aa16.08■□□□□ 0.17
SMAD4-201ENST00000342988 SUCLG1P53597 346 aaKnown RBP16.08■□□□□ 0.17
SMAD4-201ENST00000342988 MOB3BQ86TA1 216 aa16.08■□□□□ 0.17
SMAD4-201ENST00000342988 PDPNQ86YL7 162 aa16.08■□□□□ 0.17
SMAD4-201ENST00000342988 DND1Q8IYX4 353 aaKnown RBP16.08■□□□□ 0.17
SMAD4-201ENST00000342988 OR10D4PQ8NGN7 298 aa16.08■□□□□ 0.17
SMAD4-201ENST00000342988 MFSD2BA6NFX1 497 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 IAPPP10997 89 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 TMEM183AQ8IXX5 376 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 ZDHHC23Q8IYP9 409 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 OCIAD1Q9NX40 245 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 ADGRB2O60241 1585 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 SLC10A3P09131 477 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 CLN3Q13286 438 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 PELI1Q96FA3 418 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 ELOA3CA0A087WX78 387 aaPredicted RBP16.08■□□□□ 0.16
SMAD4-201ENST00000342988 IGSF23A1L1A6 192 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 NID1P14543 1247 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 CD81P60033 236 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 PAQR6Q6TCH4 344 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 Q8IYB0 196 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 ADGRL4Q9HBW9 690 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 A0A1W2PPC4 97 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 MFNGO00587 321 aa16.08■□□□□ 0.16
SMAD4-201ENST00000342988 OPN1LWP04000 364 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms