RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 EXT1Q16394 746 aa9.12□□□□□ -0.95
LIMA1-201ENST00000341247 BEX5Q5H9J7 111 aa9.12□□□□□ -0.95
LIMA1-201ENST00000341247 FAM109AQ8N4B1 249 aa9.12□□□□□ -0.95
LIMA1-201ENST00000341247 OR13C8Q8NGS7 320 aa9.12□□□□□ -0.95
LIMA1-201ENST00000341247 ZBTB8AQ96BR9 441 aa9.12□□□□□ -0.95
LIMA1-201ENST00000341247 UBQLN2Q9UHD9 624 aa9.12□□□□□ -0.95
LIMA1-201ENST00000341247 VSIG4Q9Y279 399 aa9.12□□□□□ -0.95
LIMA1-201ENST00000341247 RHBDD3Q9Y3P4 386 aa9.12□□□□□ -0.95
LIMA1-201ENST00000341247 NCKAP5O14513 1909 aa9.12□□□□□ -0.95
LIMA1-201ENST00000341247 CCDC163A0A0D9SF12 145 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 SCO1O75880 301 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 HLA-AP01891 365 aaKnown RBP9.11□□□□□ -0.95
LIMA1-201ENST00000341247 ZNF17P17021 662 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 DUSP3P51452 185 aaPredicted RBP9.11□□□□□ -0.95
LIMA1-201ENST00000341247 KCTD9Q7L273 389 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 C1QL2Q7Z5L3 287 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 OR5AS1Q8N127 324 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 ESX1Q8N693 406 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 TMEM229BQ8NBD8 167 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 OR2AE1Q8NHA4 323 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 COQ8AQ8NI60 647 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 FOXRED1Q96CU9 486 aaPredicted RBP9.11□□□□□ -0.95
LIMA1-201ENST00000341247 ALKBH3Q96Q83 286 aaPredicted RBP9.11□□□□□ -0.95
LIMA1-201ENST00000341247 PDCD10Q9BUL8 212 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 ULBP2Q9BZM5 246 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 ZNF700Q9H0M5 742 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 PTTG3PQ9NZH4 202 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 PLEKHA6Q9Y2H5 1048 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 KCNK7Q9Y2U2 307 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 DNAJC13O75165 2243 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 DOCK7Q96N67 2140 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 A0A0A6YYD4 124 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 LOC390937A0A1W2PQ73 354 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 PLSCR5A0PG75 271 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 ZNF735P0CB33 412 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 PI3P19957 117 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 CD96P40200 585 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 MC2RQ01718 297 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 Q0VFX4 171 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 WIPI1Q5MNZ9 446 aaPredicted RBP9.11□□□□□ -0.95
LIMA1-201ENST00000341247 COMMD7Q86VX2 200 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 LYPD6Q86Y78 171 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 FAM219AQ8IW50 185 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 C12orf45Q8N5I9 185 aaPredicted RBP9.11□□□□□ -0.95
LIMA1-201ENST00000341247 STEAP2Q8NFT2 490 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 OR9K2Q8NGE7 335 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 MED30Q96HR3 178 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 ARRDC1-AS1Q9H2J1 176 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 B3GNT2Q9NY97 397 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 TTLL8A6PVC2 850 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 MCRIP1C9JLW8 97 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 ONECUT2O95948 504 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 ITGB2P05107 769 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 SERPINA2P20848 420 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 MSR1P21757 451 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 DSCR4P56555 118 aaPredicted RBP9.11□□□□□ -0.95
LIMA1-201ENST00000341247 DHRS2Q13268 280 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 AQP3Q92482 292 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 UTP23Q9BRU9 249 aaKnown RBP9.11□□□□□ -0.95
LIMA1-201ENST00000341247 ANGPTL4Q9BY76 406 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 PRR13Q9NZ81 148 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 MAB21L2Q9Y586 359 aa9.11□□□□□ -0.95
LIMA1-201ENST00000341247 DMXL2Q8TDJ6 3036 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 IGKV1-9A0A0C4DH69 117 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 KCNAB3O43448 404 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 P04436 131 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 IFNA6P05013 189 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 ZNF250P15622 560 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 CFPP27918 469 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 AVPR2P30518 371 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 MLF1P58340 268 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 RAB14P61106 215 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 SEC61A1P61619 476 aaKnown RBP9.1□□□□□ -0.95
LIMA1-201ENST00000341247 SRYQ05066 204 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 CHAF1BQ13112 559 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 TIPARPQ7Z3E1 657 aaKnown RBP9.1□□□□□ -0.95
LIMA1-201ENST00000341247 OR10R2Q8NGX6 335 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 PAQR8Q8TEZ7 354 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 LYZL4Q96KX0 146 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 FANCFQ9NPI8 374 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 UPB1Q9UBR1 384 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 PADI1Q9ULC6 663 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 LOXL2Q9Y4K0 774 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 STMND1H3BQB6 276 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 CXCL13O43927 109 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 OR2A4O95047 310 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 SPDEFO95238 335 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 ADH6P28332 368 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 NTF4P34130 210 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 P2RX3P56373 397 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 ZXDAP98168 799 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 ARFRP1Q13795 201 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 PLAC9Q5JTB6 97 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 C9orf135Q5VTT2 229 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 C3P1Q6ZMU1 363 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 ADAD2Q8NCV1 583 aaKnown RBP9.1□□□□□ -0.95
LIMA1-201ENST00000341247 ST8SIA4Q92187 359 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 OR2A7Q96R45 310 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 ST6GALNAC5Q9BVH7 336 aa9.1□□□□□ -0.95
LIMA1-201ENST00000341247 TMEM59Q9BXS4 323 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms