RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 MISP3Q96FF7 219 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 MST1RQ04912 1400 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 LTN1O94822 1766 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 ORM1P02763 201 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 CSF2RAP15509 400 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 EPHA2P29317 976 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 KCNJ3P48549 501 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 DGCR2P98153 550 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 CARFQ8N187 725 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 PFN4Q8NHR9 129 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 DUS3LQ96G46 650 aaKnown RBP11.71□□□□□ -0.53
USP47-202ENST00000339865 FAM210BQ96KR6 192 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 USP22Q9UPT9 525 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 HEATR5AQ86XA9 2040 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 OOEPA6NGQ2 149 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 COL5A2P05997 1499 aaPredicted RBP11.71□□□□□ -0.54
USP47-202ENST00000339865 TIAL1Q01085 375 aaKnown RBP eCLIP11.71□□□□□ -0.54
USP47-202ENST00000339865 OR2G2Q8NGZ5 317 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 STARD4Q96DR4 205 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 DNASE2O00115 360 aaPredicted RBP11.71□□□□□ -0.54
USP47-202ENST00000339865 ZNF217O75362 1048 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 PITX1P78337 314 aaPredicted RBP11.71□□□□□ -0.54
USP47-202ENST00000339865 MARCH1Q8TCQ1 289 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 SNX22Q96L94 193 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 TAAR9Q96RI9 348 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 UTP23Q9BRU9 249 aaKnown RBP11.71□□□□□ -0.54
USP47-202ENST00000339865 TXNIPQ9H3M7 391 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 SIRPB1O00241 398 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 WNT11O96014 354 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 ICAM2P13598 275 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 ZNF343Q6P1L6 599 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 UQCC3Q6UW78 93 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 VN1R17PQ8TDU5 208 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 SEC11CQ9BY50 192 aa11.71□□□□□ -0.54
USP47-202ENST00000339865 MAGI3Q5TCQ9 1506 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 TSPAN13O95857 204 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 PVRP15151 417 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 LIMK1P53667 647 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 RING1Q06587 406 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 TMEM241Q24JQ0 296 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 DOK3Q7L591 496 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 MISPQ8IVT2 679 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 DEFB108BQ8NET1 73 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 OR4C16Q8NGL9 310 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 POM121L2Q96KW2 1035 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 FADS6Q8N9I5 356 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 EGLN2Q96KS0 407 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 KCNK15Q9H427 330 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 MARCH5Q9NX47 278 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 ANKRD10Q9NXR5 420 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 ONECUT1Q9UBC0 465 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 KIAA1217Q5T5P2 1943 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 OR5B21A6NL26 309 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 KLF7O75840 302 aaPredicted RBP11.7□□□□□ -0.54
USP47-202ENST00000339865 PIGAP37287 484 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 ZNF296Q8WUU4 475 aaPredicted RBP11.7□□□□□ -0.54
USP47-202ENST00000339865 NIPSNAP1Q9BPW8 284 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 MIOXQ9UGB7 285 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 AMDHD2Q9Y303 409 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 ANKRD26Q9UPS8 1709 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 UTS2O95399 124 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 SOD2P04179 222 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 OPRK1P41145 380 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 SSR4P51571 173 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 HLXQ14774 488 aaPredicted RBP11.7□□□□□ -0.54
USP47-202ENST00000339865 NCMAPQ5T1S8 102 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 LSRQ86X29 649 aaPredicted RBP11.7□□□□□ -0.54
USP47-202ENST00000339865 ICAM5Q9UMF0 924 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 BCL3P20749 454 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 TEAD1P28347 426 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 PRDX4Q13162 271 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 HIST3H3Q16695 136 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 SIRT6Q8N6T7 355 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 CPEB3Q8NE35 698 aaKnown RBP11.7□□□□□ -0.54
USP47-202ENST00000339865 GPX8Q8TED1 209 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 ADGRB1O14514 1584 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 HPP00738 406 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 ZBTB37Q5TC79 503 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 PTCRAQ6ISU1 281 aaPredicted RBP11.7□□□□□ -0.54
USP47-202ENST00000339865 RTP4Q96DX8 246 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 CTRCQ99895 268 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 EMC6Q9BV81 110 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 OR6C3Q9NZP0 311 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 SLC5A6Q9Y289 635 aa11.7□□□□□ -0.54
USP47-202ENST00000339865 CD1EP15812 388 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 PSMB5P28074 263 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 SPRYD7Q5W111 196 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 MUC15Q8N387 334 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 AUP1Q9Y679 476 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 PLIN4Q96Q06 1357 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 OPN1MWP04001 364 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 OPN1MW2P0DN77 364 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 OPN1MW3P0DN78 364 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 NMUP48645 174 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 REC114Q7Z4M0 266 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 MYPOPQ86VE0 399 aaPredicted RBP11.69□□□□□ -0.54
USP47-202ENST00000339865 UMODL1-AS1Q8N2C9 162 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 SOD1P00441 154 aa11.69□□□□□ -0.54
USP47-202ENST00000339865 LIPAP38571 399 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms