RNA–Protein interactions for RNA: ENST00000338585.6

MCF2-201, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-201ENST00000338585 STARD4Q96DR4 205 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 SLC25A38Q96DW6 304 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 FAM122AQ96E09 287 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 SPACA5Q96QH8 159 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 PPP1R3EQ9H7J1 279 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 MYEF2Q9P2K5 600 aaKnown RBP3.6□□□□□ -1.83
MCF2-201ENST00000338585 EXTL2Q9UBQ6 330 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 CKLFQ9UBR5 152 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 TINAGQ9UJW2 476 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 FOXJ3Q9UPW0 622 aa3.6□□□□□ -1.83
MCF2-201ENST00000338585 DSPP15924 2871 aaKnown RBP3.59□□□□□ -1.83
MCF2-201ENST00000338585 IGKV1-9A0A0C4DH69 117 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 A0A0U1RQV5 110 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 CIB4A0PJX0 185 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 FIGNL2A6NMB9 653 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 WDR1O75083 606 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 NGFP01138 241 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 CELA3BP08861 270 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 TMIGD3P0DMS9 266 aaPredicted RBP3.59□□□□□ -1.83
MCF2-201ENST00000338585 GABRA1P14867 456 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 ACKR3P25106 362 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 STOMP27105 288 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 DDOSTP39656 456 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 PLA2G5P39877 138 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 EFNB2P52799 333 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 ZNF92Q03936 586 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 IL18Q14116 193 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 GABRA6Q16445 453 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 GSG1Q2KHT4 349 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 FAM166AQ6J272 317 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 GFRALQ6UXV0 394 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 DOK3Q7L591 496 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 BIVMQ86UB2 503 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 LRRC28Q86X40 367 aaPredicted RBP3.59□□□□□ -1.83
MCF2-201ENST00000338585 CXorf67Q86X51 503 aaPredicted RBP3.59□□□□□ -1.83
MCF2-201ENST00000338585 LYPD6Q86Y78 171 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 LYSMD2Q8IV50 215 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 OR8H2Q8N162 312 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 GABRG1Q8N1C3 465 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 JAGN1Q8N5M9 183 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 OR1M1Q8NGA1 313 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 OR51D1Q8NGF3 324 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 OR4D6Q8NGJ1 314 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 OR52H1Q8NGJ2 320 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 PRR7Q8TB68 274 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 NPRL2Q8WTW4 380 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 THRSPQ92748 146 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 SLC25A28Q96A46 364 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 REEP6Q96HR9 211 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 POM121L2Q96KW2 1035 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 ZNF75AQ96N20 296 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 SOSTQ9BQB4 213 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 C1QTNF6Q9BXI9 259 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 OR10A2Q9H208 303 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 OR51B6Q9H340 312 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 PLEKHA1Q9HB21 404 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 PALMDQ9NP74 551 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 NPDC1Q9NQX5 325 aaPredicted RBP3.59□□□□□ -1.83
MCF2-201ENST00000338585 PLSCR4Q9NRQ2 329 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 CYSLTR2Q9NS75 346 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 ABRACLQ9P1F3 81 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 SPATA2Q9UM82 520 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 RHBDD3Q9Y3P4 386 aa3.59□□□□□ -1.83
MCF2-201ENST00000338585 TPRP12270 2363 aaKnown RBP3.59□□□□□ -1.84
MCF2-201ENST00000338585 hCG_2014768A0A024R1R8 64 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 LINC00854A0A1B0GVQ3 168 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 SLC17A2O00624 439 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 SLC19A2O60779 497 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 DHRS3O75911 302 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 AGFG2O95081 481 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 APOC1P02654 83 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 GLI4P10075 376 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 IL7P13232 177 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 COX5AP20674 150 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 BDKRB2P30411 391 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 ARR3P36575 388 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 TAB1Q15750 504 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 UBE2V2Q15819 145 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 RAB11BQ15907 218 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 PYDC2Q56P42 97 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 OR10K2Q6IF99 312 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 ZNF529Q6P280 563 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 MTFR2Q6P444 385 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 ZNF101Q8IZC7 436 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 CMTM4Q8IZR5 234 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 OR5D14Q8NGL3 314 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 GCDHQ92947 438 aaPredicted RBP3.59□□□□□ -1.84
MCF2-201ENST00000338585 ABHD1Q96SE0 405 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 GAL3ST1Q99999 423 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 C1QTNF5Q9BXJ0 243 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 POFUT1Q9H488 388 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 TMEM138Q9NPI0 162 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 CRIM1Q9NZV1 1036 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 STEAP1Q9UHE8 339 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 PROCRQ9UNN8 238 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 PIGLQ9Y2B2 252 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 V9GYS6 101 aa3.59□□□□□ -1.84
MCF2-201ENST00000338585 A0A1W2PQ09 198 aa3.58□□□□□ -1.84
MCF2-201ENST00000338585 TTLL8A6PVC2 850 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms