RNA–Protein interactions for RNA: ENST00000338546.9

HPS1-202, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best) BASIC

Gene HPS1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-202ENST00000338546 NAA40Q86UY6 237 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 OR5AS1Q8N127 324 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 OR52N4Q8NGI2 321 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 OR13C9Q8NGT0 318 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 SSC4DQ8WTU2 575 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 CREB3L1Q96BA8 519 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 SGK3Q96BR1 496 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 NUDT16L1Q9BRJ7 211 aaKnown RBP14.2□□□□□ -0.14
HPS1-202ENST00000338546 MARVELD1Q9BSK0 173 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 CNTD2Q9H8S5 307 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 NEK6Q9HC98 313 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 CLCF1Q9UBD9 225 aa14.2□□□□□ -0.14
HPS1-202ENST00000338546 OR14I1A6ND48 311 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 METTL21EPA6NDL7 271 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 E9PLN8 166 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 SULT1C2O00338 296 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 ORC5O43913 435 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 DBHP09172 617 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 TRAPPC2P0DI81 140 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 TRAPPC2BP0DI82 140 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 ABOP16442 354 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 MPGP29372 298 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 GDNFP39905 211 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 OR3A2P47893 321 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 GSK3AP49840 483 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 NHLH1Q02575 133 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 SF3B4Q15427 424 aaKnown RBP eCLIP14.19□□□□□ -0.149e-8■■■■■ 34.9
HPS1-202ENST00000338546 RSPO4Q2I0M5 234 aaPredicted RBP14.19□□□□□ -0.14
HPS1-202ENST00000338546 FBXW9Q5XUX1 488 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 Q6ZS92 163 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.19□□□□□ -0.14
HPS1-202ENST00000338546 OR2W3Q7Z3T1 314 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 NUFIP2Q7Z417 695 aaKnown RBP14.19□□□□□ -0.14
HPS1-202ENST00000338546 P4HA3Q7Z4N8 544 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 SIAH3Q8IW03 269 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 IZUMO1Q8IYV9 350 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 CHST5Q9GZS9 411 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 TAS2R8Q9NYW2 309 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 GHRLQ9UBU3 117 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 KLK13Q9UKR3 277 aa14.19□□□□□ -0.14
HPS1-202ENST00000338546 CNOT4O95628 575 aaKnown RBP14.18□□□□□ -0.14
HPS1-202ENST00000338546 ALDH3B1P43353 468 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 EFNB2P52799 333 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 BTG1P62324 171 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 PLA1AQ53H76 456 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 PABPC1L2AQ5JQF8 200 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 TMEM53Q6P2H8 277 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 KRT74Q7RTS7 529 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 CDH24Q86UP0 819 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 SEMA6DQ8NFY4 1073 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 OR4D6Q8NGJ1 314 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 OR52I2Q8NH67 350 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 AKR7LQ8NHP1 331 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 SLC7A6Q92536 515 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 SOX7Q9BT81 388 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 C1QTNF5Q9BXJ0 243 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 ATG5Q9H1Y0 275 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 MMP28Q9H239 520 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 SCPEP1Q9HB40 452 aa14.18□□□□□ -0.14
HPS1-202ENST00000338546 PTPRZ1P23471 2315 aaPredicted RBP14.18□□□□□ -0.14
HPS1-202ENST00000338546 MEIOCA2RUB1 952 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 AHRRA9YTQ3 701 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 XRCC2O43543 280 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 IGHV3-9P01782 118 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 LCATP04180 440 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 QRFPP83859 136 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 RIPPLY1Q0D2K3 151 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 FAPQ12884 760 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 SNTB2Q13425 540 aaKnown RBP14.17□□□□□ -0.14
HPS1-202ENST00000338546 GFOD2Q3B7J2 385 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 ZBTB37Q5TC79 503 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 COLCA1Q6ZS62 124 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 UBE2J2Q8N2K1 259 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 FGFBP3Q8TAT2 258 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 AKAP1Q92667 903 aaKnown RBP eCLIP14.17□□□□□ -0.14
HPS1-202ENST00000338546 WNT2BQ93097 391 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 CPNE2Q96FN4 548 aaPredicted RBP14.17□□□□□ -0.14
HPS1-202ENST00000338546 REEP6Q96HR9 211 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 DPAGT1Q9H3H5 408 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 ZNF224Q9NZL3 707 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 NLKQ9UBE8 527 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 H7C417 338 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 TMIGD3P0DMS9 266 aaPredicted RBP14.17□□□□□ -0.14
HPS1-202ENST00000338546 ANOS1P23352 680 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 HLA-DMAP28067 261 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 RAG2P55895 527 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 PLA2G7Q13093 441 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 SNAI3Q3KNW1 292 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 OR2A2Q6IF42 318 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 ANGPTL5Q86XS5 388 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 CCDC36Q8IYA8 594 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 PNLDC1Q8NA58 520 aaKnown RBP14.17□□□□□ -0.14
HPS1-202ENST00000338546 NANOS1Q8WY41 292 aaKnown RBP14.17□□□□□ -0.14
HPS1-202ENST00000338546 SPSB4Q96A44 273 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 TECTBQ96PL2 329 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 MTFP1Q9UDX5 166 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 PIGLQ9Y2B2 252 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 NUBP2Q9Y5Y2 271 aa14.17□□□□□ -0.14
HPS1-202ENST00000338546 FREM2Q5SZK8 3169 aa14.16□□□□□ -0.14
HPS1-202ENST00000338546 TRAV18A0A075B6X5 111 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms