RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SLC22A5O76082 557 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 ALX3O95076 343 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 TGM6O95932 706 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 LPLP06858 475 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 CD63P08962 238 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 CCNOP22674 350 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 AVPR2P30518 371 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 MPLP40238 635 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 PCK2Q16822 640 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 ELFN2Q5R3F8 820 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 ZNF774Q6NX45 483 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 C5orf46Q6UWT4 87 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 LIX1LQ8IVB5 337 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 OR9K2Q8NGE7 335 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 FGFBP3Q8TAT2 258 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 HDHD3Q9BSH5 251 aaPredicted RBP7.79□□□□□ -1.16
SNCA-201ENST00000336904 ST6GALNAC5Q9BVH7 336 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 TCFL5Q9UL49 500 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 ZFHX2Q9C0A1 2572 aaPredicted RBP7.79□□□□□ -1.16
SNCA-201ENST00000336904 FAM221AA4D161 298 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 L7N2F9 121 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 SPRY1O43609 319 aaPredicted RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 SPDEFO95238 335 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 JMJD7P0C870 316 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 ZNF250P15622 560 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 NAGAP17050 411 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 GDF1P27539 372 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 MSX1P28360 303 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 FAUP35544 74 aaKnown RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 CD96P40200 585 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 RGS19P49795 217 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 SNU13P55769 128 aaKnown RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 IGFBP7Q16270 282 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 PLAC9Q5JTB6 97 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 NKAPLQ5M9Q1 402 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 ATPAF1Q5TC12 328 aaPredicted RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 DHRS13Q6UX07 377 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 RAB11FIP2Q7L804 512 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 GALNTL5Q7Z4T8 443 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 OR5D14Q8NGL3 314 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 OR13C8Q8NGS7 320 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 OR6X1Q8NH79 312 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 COQ8AQ8NI60 647 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 MRGPRFQ96AM1 343 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 ARHGAP5-AS1Q96IT6 56 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 ZC3H10Q96K80 434 aaKnown RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 CMTM3Q96MX0 182 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 SFXN2Q96NB2 322 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 OR51B6Q9H340 312 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 IFT46Q9NQC8 304 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 GPR173Q9NS66 373 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 PADI1Q9ULC6 663 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 NOP16Q9Y3C1 178 aaKnown RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 A0A096LPE4 126 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 A0A1W2PPZ6 126 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 UBE2QL1A1L167 161 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 NAP1L6A6NFF2 107 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 OR2AT4A6NND4 320 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 SSX5O60225 188 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 HLA-AP01891 365 aaKnown RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 ITGB2P05107 769 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 ISG15P05161 165 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 TPOP07202 933 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 OR4E1P0C645 316 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 GUCA1AP43080 201 aaPredicted RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 NPY4RP50391 375 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 GNG2P59768 71 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 SLC35A1P78382 337 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 MC2RQ01718 297 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 ENDOGQ14249 297 aaKnown RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 ZIC4Q8N9L1 334 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 OR2AK2Q8NG84 335 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 RNF138Q8WVD3 245 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 ST8SIA4Q92187 359 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 THOC3Q96J01 351 aaKnown RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 ARL6Q9H0F7 186 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 ZNF700Q9H0M5 742 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 CLEC4MQ9H2X3 399 aaPredicted RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 GPN1Q9HCN4 374 aaPredicted RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 P4HTMQ9NXG6 502 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 FAM230AA0A1W2PPH8 454 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 LEUTXA8MZ59 168 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 P04436 131 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 GLI4P10075 376 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 FCGR2AP12318 317 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 FSTP19883 344 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 GABRR1P24046 479 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 OR3A3P47888 321 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 FOXG1P55316 489 aaPredicted RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 MLF1P58340 268 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 OPCMLQ14982 345 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 UBE2V2Q15819 145 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 RSPO1Q2MKA7 263 aaPredicted RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 RNASE10Q5GAN6 216 aaKnown RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 SLC25A53Q5H9E4 307 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 FAM74A1Q5RGS3 127 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 DCAF12Q5T6F0 453 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 C5orf24Q7Z6I8 188 aa7.78□□□□□ -1.16
SNCA-201ENST00000336904 GTPBP8Q8N3Z3 284 aaPredicted RBP7.78□□□□□ -1.16
SNCA-201ENST00000336904 SLC22A24Q8N4F4 322 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms