RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SERPINE3A8MV23 424 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 SLC10A3P09131 477 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 S100A4P26447 101 aaKnown RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 TM4SF1P30408 202 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 RAG2P55895 527 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 FAM209BQ5JX69 171 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ERGIC1Q969X5 290 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ARHGAP32A7KAX9 2087 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 TRAV1-2A0A0B4J238 106 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 SERINC4A6NH21 518 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 DOK2O60496 412 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ZFAND5O76080 213 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 GPR75O95800 540 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 GNB1P62873 340 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 SNRPNP63162 240 aaKnown RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 STPG2Q8N412 459 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 OR4C12Q96R67 309 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ANGPTL4Q9BY76 406 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 H7C1C5 153 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ICAM2P13598 275 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 GDF1P27539 372 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 HTR6P50406 440 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF385BQ569K4 471 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF628Q5EBL2 1059 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 Q6ZPB1 254 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 RTN4IP1Q8WWV3 396 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 RTL8AQ9BWD3 113 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 LPAR3Q9UBY5 353 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 J3KTA2 159 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 TNFRSF10CO14798 259 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF737O75373 536 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 GYPAP02724 150 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 CRYBA1P05813 215 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 RANBP10Q6VN20 620 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 EDARADDQ8WWZ3 215 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 IL22RA2Q969J5 263 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 IGSF8Q969P0 613 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 SLC17A9Q9BYT1 436 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 CHST11Q9NPF2 352 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 NDRG4Q9ULP0 352 aaKnown RBP5.64□□□□□ -1.51
CSMD1-201ENST00000335551 SLC45A2Q9UMX9 530 aa5.64□□□□□ -1.51
CSMD1-201ENST00000335551 MAP1LC3B2A6NCE7 125 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 SOX15O60248 233 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 CLEC2LP0C7M8 214 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 RPA2P15927 270 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 HIST1H1CP16403 213 aaKnown RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 LRFN3Q9BTN0 628 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 COL25A1Q9BXS0 654 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 PARD6GQ9BYG4 376 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 MAP1LC3BQ9GZQ8 125 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 TRAPPC4Q9Y296 219 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 IVDP26440 423 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 AOAHP28039 575 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 TMEM251Q8N6I4 163 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF383Q8NA42 475 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 FAM71CQ8NEG0 241 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 RAB40CQ96S21 281 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 NUDT16L1Q9BRJ7 211 aaKnown RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 NAT8Q9UHE5 227 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 POLDIP2Q9Y2S7 368 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 SOWAHBA6NEL2 793 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 CRHP06850 196 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ABOP16442 354 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 SLC35G1Q2M3R5 365 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 DCXRQ7Z4W1 244 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 OSTM1Q86WC4 334 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ARRDC1Q8N5I2 433 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ZDHHC22Q8N966 263 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 LHFPL5Q8TAF8 219 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ISG20Q96AZ6 181 aaKnown RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 YIPF6Q96EC8 236 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 WFIKKN1Q96NZ8 548 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 PPP1R3CQ9UQK1 317 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 SOD2P04179 222 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ANKRD34CP0C6C1 535 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 RHOBP62745 196 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ERASQ7Z444 233 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 IL17BQ9UHF5 180 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ZNF646O15015 1829 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 ATAD5Q96QE3 1844 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 IGKV6D-41A0A0C4DH26 115 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 SLC5A10A0PJK1 596 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 FZD9O00144 591 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 BTF3P20290 206 aaKnown RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 AFMIDQ63HM1 303 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 C3orf30Q96M34 536 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 DYSFO75923 2080 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 CAMTA1Q9Y6Y1 1673 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 TRBV11-1A0A0K0K1C0 115 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 C1orf105O95561 183 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 PGA3P0DJD8 388 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 NPY1RP25929 384 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 CEBPDP49716 269 aaPredicted RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 RPS23P62266 143 aaKnown RBP5.63□□□□□ -1.51
CSMD1-201ENST00000335551 SMIM21Q3B7S5 101 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 OR10A7Q8NGE5 316 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 FAM131CQ96AQ9 280 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 KIR2DS5A0A0G2JLQ3 304 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 A0A0G2JNG1 304 aa5.63□□□□□ -1.51
CSMD1-201ENST00000335551 KIR2DS3K7RE56 304 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms