RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 RGS9O75916 674 aaPredicted RBP18.52■□□□□ 0.55
TPM1-204ENST00000334895 GABARAPO95166 117 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 HLA-DPB1P04440 258 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 PPP1CBP62140 327 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 TNK1Q13470 666 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 GK2Q14410 553 aaPredicted RBP18.52■□□□□ 0.55
TPM1-204ENST00000334895 HLXQ14774 488 aaPredicted RBP18.52■□□□□ 0.55
TPM1-204ENST00000334895 TRAM1Q15629 374 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 SPATA46Q5T0L3 261 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 FOXB2Q5VYV0 432 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 Q6ZSR3 168 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 ACBD4Q8NC06 268 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 GPR148Q8TDV2 347 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 PLPPR2Q96GM1 343 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 PSMG3-AS1Q96PY0 264 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 PPIL3Q9H2H8 161 aaKnown RBP18.52■□□□□ 0.55
TPM1-204ENST00000334895 RGCCQ9H4X1 137 aa18.52■□□□□ 0.55
TPM1-204ENST00000334895 hCG_38984A0A1B0GV85 526 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 A0A1B0GVI7 797 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 DEFB108AA8MXU0 73 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 ATE1O95260 518 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 SOX2P48431 317 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 NKX6-1P78426 367 aaPredicted RBP18.51■□□□□ 0.55
TPM1-204ENST00000334895 CTF1Q16619 201 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 Q499Y3 187 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 ACSM3Q53FZ2 586 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 UNQ9370/PRO34162Q6UXP9 181 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 DOK3Q7L591 496 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 COMMD2Q86X83 199 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 DMRTC2Q8IXT2 367 aaPredicted RBP18.51■□□□□ 0.55
TPM1-204ENST00000334895 OR1J1Q8NGS3 322 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 CENPOQ9BU64 300 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 REPIN1Q9BWE0 567 aaKnown RBP18.51■□□□□ 0.55
TPM1-204ENST00000334895 RNF167Q9H6Y7 350 aa18.51■□□□□ 0.55
TPM1-204ENST00000334895 AIREO43918 545 aa18.5■□□□□ 0.55
TPM1-204ENST00000334895 LOXP28300 417 aaPredicted RBP18.5■□□□□ 0.55
TPM1-204ENST00000334895 RAD52P43351 418 aa18.5■□□□□ 0.55
TPM1-204ENST00000334895 KIR2DL3P43628 341 aa18.5■□□□□ 0.55
TPM1-204ENST00000334895 FAM3AP98173 230 aa18.5■□□□□ 0.55
TPM1-204ENST00000334895 FAM27D1Q5T7N8 215 aa18.5■□□□□ 0.55
TPM1-204ENST00000334895 OR14K1Q8NGZ2 314 aa18.5■□□□□ 0.55
TPM1-204ENST00000334895 SLC25A40Q8TBP6 338 aa18.5■□□□□ 0.55
TPM1-204ENST00000334895 OR2J1Q9GZK6 312 aa18.5■□□□□ 0.55
TPM1-204ENST00000334895 ZNF391Q9UJN7 358 aa18.5■□□□□ 0.55
TPM1-204ENST00000334895 KLF2Q9Y5W3 355 aaPredicted RBP18.5■□□□□ 0.55
TPM1-204ENST00000334895 PLCE1Q9P212 2302 aa18.5■□□□□ 0.55
TPM1-204ENST00000334895 LOC100506127A0A0U1RQW1 187 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 ZNF879B4DU55 563 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 PIN1P1O15428 100 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 OCM2P0CE71 109 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 ACKR3P25106 362 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 TGFBR1P36897 503 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 LSM3P62310 102 aaKnown RBP18.49■□□□□ 0.55
TPM1-204ENST00000334895 MALLQ13021 153 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 SNTB2Q13425 540 aaKnown RBP18.49■□□□□ 0.55
TPM1-204ENST00000334895 MSMPQ1L6U9 139 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 ZMAT1Q5H9K5 638 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 TMEM255AQ5JRV8 349 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 CEACAM19Q7Z692 300 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 PIAS4Q8N2W9 510 aaPredicted RBP18.49■□□□□ 0.55
TPM1-204ENST00000334895 OR5L1Q8NGL2 311 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 TSEN15Q8WW01 171 aaKnown RBP18.49■□□□□ 0.55
TPM1-204ENST00000334895 AKAP1Q92667 903 aaKnown RBP eCLIP18.49■□□□□ 0.55
TPM1-204ENST00000334895 ORAI1Q96D31 301 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 MARS2Q96GW9 593 aaKnown RBP18.49■□□□□ 0.55
TPM1-204ENST00000334895 DERL3Q96Q80 235 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 BCL2L14Q9BZR8 327 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 ESRP2Q9H6T0 727 aaKnown RBP18.49■□□□□ 0.55
TPM1-204ENST00000334895 EXOSC4Q9NPD3 245 aaKnown RBP18.49■□□□□ 0.55
TPM1-204ENST00000334895 TXNL4BQ9NX01 149 aaKnown RBP18.49■□□□□ 0.55
TPM1-204ENST00000334895 V9GYS6 101 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 TRBV5-7A0A0A0MS05 114 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 SMIM31A0A1B0GVY4 71 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 A0A1W2PPK0 400 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 DHRS3O75911 302 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 SERPINA3P01011 423 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 GALP22466 123 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 FGF9P31371 208 aaPredicted RBP18.49■□□□□ 0.55
TPM1-204ENST00000334895 OR8B8Q15620 311 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 TIMM50Q3ZCQ8 353 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 BEX5Q5H9J7 111 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 C22orf42Q6IC83 251 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 ASPHD2Q6ICH7 369 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 ADAM5Q6NVV9 412 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 FBXW12Q6X9E4 464 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 OR13C3Q8NGS6 347 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 ISOC1Q96CN7 298 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 RADILQ96JH8 1075 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 ZNF275Q9NSD4 429 aaPredicted RBP18.49■□□□□ 0.55
TPM1-204ENST00000334895 SSR3Q9UNL2 185 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 DHDHQ9UQ10 334 aa18.49■□□□□ 0.55
TPM1-204ENST00000334895 LOC390937A0A1W2PQ73 354 aa18.48■□□□□ 0.55
TPM1-204ENST00000334895 A6NIN4 97 aa18.48■□□□□ 0.55
TPM1-204ENST00000334895 GSK3AP49840 483 aa18.48■□□□□ 0.55
TPM1-204ENST00000334895 TMBIM6P55061 237 aa18.48■□□□□ 0.55
TPM1-204ENST00000334895 NCS1P62166 190 aa18.48■□□□□ 0.55
TPM1-204ENST00000334895 PGAP1Q75T13 922 aa18.48■□□□□ 0.55
TPM1-204ENST00000334895 TMEM106AQ96A25 262 aa18.48■□□□□ 0.55
TPM1-204ENST00000334895 ADAT3Q96EY9 351 aaPredicted RBP18.48■□□□□ 0.55
TPM1-204ENST00000334895 HS3ST6Q96QI5 342 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms