RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 OR52I2Q8NH67 350 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 HEYLQ9NQ87 328 aaPredicted RBP13.44□□□□□ -0.26
C9orf47-201ENST00000334490 NPIPB8E9PQR5 432 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 GABARAPH6UMI1 98 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 CDC42EP2O14613 210 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 AGPAT2O15120 278 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 WDR1O75083 606 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 WISP3O95389 354 aaPredicted RBP13.44□□□□□ -0.26
C9orf47-201ENST00000334490 APOA2P02652 100 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 TPT1P13693 172 aaKnown RBP13.44□□□□□ -0.26
C9orf47-201ENST00000334490 CDKN2AP42771 156 aaKnown RBP13.44□□□□□ -0.26
C9orf47-201ENST00000334490 UCNP55089 124 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 FAM27D1Q5T7N8 215 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 PP6455Q8WZ26 134 aa13.44□□□□□ -0.26
C9orf47-201ENST00000334490 B8ZZF3 427 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 K7EPK0 472 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 PATE4P0C8F1 98 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 GLI4P10075 376 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 ALOX5APP20292 161 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 OR2T2Q6IF00 324 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 FAM71E2Q8N5Q1 922 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 ASF1BQ9NVP2 202 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 PRICKLE3O43900 615 aaPredicted RBP13.43□□□□□ -0.26
C9orf47-201ENST00000334490 CNIH1O95406 144 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 SLC30A7Q8NEW0 376 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 OR2Z1Q8NG97 314 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 SCPEP1Q9HB40 452 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 SLC23A1Q9UHI7 598 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 A0A0B4J203 849 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 BTBD17A6NE02 478 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 RAB27BO00194 218 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 FUT6P51993 359 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 GNB2P62879 340 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 IAH1Q2TAA2 248 aaPredicted RBP13.43□□□□□ -0.26
C9orf47-201ENST00000334490 SMIM21Q3B7S5 101 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 TMEM108Q6UXF1 575 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 SEH1LQ96EE3 360 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 HIPK2Q9H2X6 1198 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 ANGPTL7O43827 346 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 CTLA4P16410 223 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 S100PP25815 95 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 HEPHL1Q6MZM0 1159 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 LGI3Q8N145 548 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 NUDCD2Q8WVJ2 157 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 FLRT3Q9NZU0 649 aa13.43□□□□□ -0.26
C9orf47-201ENST00000334490 MGMTP16455 207 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 KITLGP21583 273 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 ECI1P42126 302 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 GPM6AP51674 278 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 GK2Q14410 553 aaPredicted RBP13.42□□□□□ -0.26
C9orf47-201ENST00000334490 SLC23A3Q6PIS1 610 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 PRR7Q8TB68 274 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 RGPD3A6NKT7 1758 aaPredicted RBP13.42□□□□□ -0.26
C9orf47-201ENST00000334490 A0A1W2PR77 199 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 ACTL6AO96019 429 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 SUMF1Q8NBK3 374 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 UNKLQ9H9P5 680 aaKnown RBP13.42□□□□□ -0.26
C9orf47-201ENST00000334490 PPP1R14DQ9NXH3 145 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 KIF25Q9UIL4 384 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 FBXL2Q9UKC9 423 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 DTX4Q9Y2E6 619 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 FBXO24O75426 580 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 EPPINO95925 133 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 TGFBR1P36897 503 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 HTR2BP41595 481 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 OR10X1Q8NGY0 326 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 ZNF416Q9BWM5 594 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 RAB33BQ9H082 229 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 TRAPPC4Q9Y296 219 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 SDCBPO00560 298 aaPredicted RBP13.42□□□□□ -0.26
C9orf47-201ENST00000334490 SPRY1O43609 319 aaPredicted RBP13.42□□□□□ -0.26
C9orf47-201ENST00000334490 THBS4P35443 961 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 TGIF1Q15583 401 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 ATG4DQ86TL0 474 aaPredicted RBP13.42□□□□□ -0.26
C9orf47-201ENST00000334490 CXorf67Q86X51 503 aaPredicted RBP13.42□□□□□ -0.26
C9orf47-201ENST00000334490 RIMS4Q9H426 269 aaPredicted RBP13.42□□□□□ -0.26
C9orf47-201ENST00000334490 PILRAQ9UKJ1 303 aa13.42□□□□□ -0.26
C9orf47-201ENST00000334490 BRCA1P38398 1863 aaKnown RBP13.41□□□□□ -0.26
C9orf47-201ENST00000334490 MLF1P58340 268 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 AKR1C1Q04828 323 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 HNF4GQ14541 408 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 MAFIPQ8WZ33 124 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 OR5B12Q96R08 314 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 ZNF649Q9BS31 505 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 PLK3Q9H4B4 646 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 CES1P1Q9UKY3 287 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 S100A7AQ86SG5 101 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 RND1Q92730 232 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 ARL11Q969Q4 196 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 NKX2-8O15522 239 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 ATF1P18846 271 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 SSTR2P30874 369 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 CSF2RBP32927 897 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 GNG3P63215 75 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 OSR2Q8N2R0 312 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 OR2M7Q8NG81 312 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 OR2AE1Q8NHA4 323 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 ZNF721Q8TF20 911 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 TM4SF19Q96DZ7 209 aa13.41□□□□□ -0.26
C9orf47-201ENST00000334490 TAS2R5Q9NYW4 299 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms