RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 ACTG1P63261 375 aa10.65□□□□□ -0.7
LIMK2-202ENST00000333611 S100A7AQ86SG5 101 aa10.65□□□□□ -0.7
LIMK2-202ENST00000333611 GVQW1Q8N7I0 195 aa10.65□□□□□ -0.7
LIMK2-202ENST00000333611 FGF13Q92913 245 aa10.65□□□□□ -0.7
LIMK2-202ENST00000333611 APOOQ9BUR5 198 aa10.65□□□□□ -0.7
LIMK2-202ENST00000333611 LRIT1Q9P2V4 623 aa10.65□□□□□ -0.7
LIMK2-202ENST00000333611 PRR32B1ATL7 298 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 CTDSPLO15194 276 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 CA11O75493 328 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 CD37P11049 281 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 GRK6P43250 576 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 PPP1CAP62136 330 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 PPP2CBP62714 309 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 PPP2CAP67775 309 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 BTNL3Q6UXE8 466 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 OVCH1Q7RTY7 1134 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 DND1Q8IYX4 353 aaKnown RBP10.64□□□□□ -0.71
LIMK2-202ENST00000333611 SLC35G3Q8N808 338 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 ADAD2Q8NCV1 583 aaKnown RBP10.64□□□□□ -0.71
LIMK2-202ENST00000333611 EXTL1Q92935 676 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 SERINC2Q96SA4 455 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 TBX21Q9UL17 535 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 OBSL1O75147 1896 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 SZT2Q5T011 3432 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 HEATR5AQ86XA9 2040 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 TRAV8-7A0A075B6U6 113 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 CXorf51AA0A1B0GTR3 108 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 SOX1O00570 391 aaPredicted RBP10.64□□□□□ -0.71
LIMK2-202ENST00000333611 DLEU1O43261 78 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 CDC40O60508 579 aaKnown RBP eCLIP10.64□□□□□ -0.714e-7■■■■□ 26.3
LIMK2-202ENST00000333611 TRAPPC6AO75865 159 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 SLC22A6Q4U2R8 563 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 COMMD1Q8N668 190 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 MARCH1Q8TCQ1 289 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 FAM3CQ92520 227 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 PPP1R14AQ96A00 147 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 CMBLQ96DG6 245 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 GFI1Q99684 422 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 TEX101Q9BY14 249 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 KLHDC2Q9Y2U9 406 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 A0A0B4J2E0 115 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 A0A1B0GX12 115 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 MASP2O00187 686 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 STK17BO94768 372 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 CTSBP07858 339 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 GAAP10253 952 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 RPS23P62266 143 aaKnown RBP10.64□□□□□ -0.71
LIMK2-202ENST00000333611 EIF5AP63241 154 aaKnown RBP10.64□□□□□ -0.71
LIMK2-202ENST00000333611 RAB32Q13637 225 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 ANKRD39Q53RE8 183 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 VWA2Q5GFL6 755 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 SSX7Q7RTT5 188 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 OR9K2Q8NGE7 335 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 OR1E3Q8WZA6 343 aa10.64□□□□□ -0.71
LIMK2-202ENST00000333611 ZNF764Q96H86 408 aaPredicted RBP10.64□□□□□ -0.71
LIMK2-202ENST00000333611 TDRD6O60522 2096 aaKnown RBP10.63□□□□□ -0.71
LIMK2-202ENST00000333611 GPR75O95800 540 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 CXCL1P09341 107 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 SLC2A5P22732 501 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 GDI1P31150 447 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 ZNF574Q6ZN55 896 aaPredicted RBP10.63□□□□□ -0.71
LIMK2-202ENST00000333611 FAM174AQ8TBP5 190 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 CDC6Q99741 560 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 TRIM2Q9C040 744 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 OR11A1Q9GZK7 315 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 HRASLS2Q9NWW9 162 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 PRSS38A1L453 326 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 H0YL77 283 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 RPLP1P05386 114 aaKnown RBP10.63□□□□□ -0.71
LIMK2-202ENST00000333611 C1orf61Q13536 156 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 MST1LQ2TV78 715 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 CST9LP1Q5W188 147 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 CLEC2AQ6UVW9 174 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 PRR22Q8IZ63 422 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 CSNK1A1LQ8N752 337 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 OR4C3Q8NH37 302 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 HDAC8Q9BY41 377 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 UBQLN4Q9NRR5 601 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 TRAV34A0A0B4J273 112 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 OGG1O15527 345 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 CRHP06850 196 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 CD14P08571 375 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 CDKN2AP42771 156 aaKnown RBP10.63□□□□□ -0.71
LIMK2-202ENST00000333611 DIO1P49895 249 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 ZNF345Q14585 488 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 MESTQ5EB52 335 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 C11orf42Q8N5U0 333 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 NTNG2Q96CW9 530 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 STACQ99469 402 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 FAAP24Q9BTP7 215 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 COMMD4Q9H0A8 199 aa10.63□□□□□ -0.71
LIMK2-202ENST00000333611 OR6A2O95222 327 aa10.62□□□□□ -0.71
LIMK2-202ENST00000333611 DIRAS3O95661 229 aa10.62□□□□□ -0.71
LIMK2-202ENST00000333611 CD79AP11912 226 aa10.62□□□□□ -0.71
LIMK2-202ENST00000333611 MMP9P14780 707 aa10.62□□□□□ -0.71
LIMK2-202ENST00000333611 ADRA2CP18825 462 aa10.62□□□□□ -0.71
LIMK2-202ENST00000333611 CARD18P57730 90 aa10.62□□□□□ -0.71
LIMK2-202ENST00000333611 RPS21P63220 83 aaKnown RBP10.62□□□□□ -0.71
LIMK2-202ENST00000333611 SPOCK1Q08629 439 aa10.62□□□□□ -0.71
LIMK2-202ENST00000333611 PMS2P11Q13670 270 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms