RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 RAB22AQ9UL26 194 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 HSF4Q9ULV5 492 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 A0A087WV48 116 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 ELOA3DA6NLF2 546 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-201ENST00000328923 RAB27BO00194 218 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 WNT11O96014 354 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 CD1AP06126 327 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 PRSS3P35030 304 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 BSGP35613 385 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 UCP2P55851 309 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 FUT5Q11128 374 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 CRMP1Q14194 572 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 TMEM205Q6UW68 189 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 P4HA3Q7Z4N8 544 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 OR4X1Q8NH49 305 aa10.6□□□□□ -0.71
SHMT2-201ENST00000328923 MRPS2Q9Y399 296 aaKnown RBP10.6□□□□□ -0.71
SHMT2-201ENST00000328923 XKRY2A2RUG3 117 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 A6NIZ1 184 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 OR4C45A6NMZ5 311 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 XKRYO14609 159 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 ERAL1O75616 437 aaKnown RBP10.59□□□□□ -0.71
SHMT2-201ENST00000328923 GYPBP06028 91 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 ZNF735P0CB33 412 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 ZNF28P17035 718 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 POLR2LP62875 67 aaKnown RBP10.59□□□□□ -0.71
SHMT2-201ENST00000328923 UNQ9370/PRO34162Q6UXP9 181 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 Q6ZNB5 142 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 NUP54Q7Z3B4 507 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 SLC25A42Q86VD7 318 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 COMMD1Q8N668 190 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 ARL14EPQ8N8R7 260 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-201ENST00000328923 SLC2A12Q8TD20 617 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 CDS1Q92903 461 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 DNAJA3Q96EY1 480 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 SLC6A7Q99884 636 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 C1QTNF2Q9BXJ5 285 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 IL21Q9HBE4 155 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 AURKAIP1Q9NWT8 199 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-201ENST00000328923 SLC13A4Q9UKG4 626 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 YBX2Q9Y2T7 364 aaKnown RBP10.59□□□□□ -0.71
SHMT2-201ENST00000328923 A8MVM7 634 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 ATXN7O15265 892 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-201ENST00000328923 CTAG2O75638 210 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 C1QL1O75973 258 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 CTSAP10619 480 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 CEACAM1P13688 526 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 F3P13726 295 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 HOXB2P14652 356 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 ADRA2CP18825 462 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 GZMHP20718 246 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 FUT3P21217 361 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 DTYMKP23919 212 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 TEAD1P28347 426 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 GLIPR1P48060 266 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 GABRA4P48169 554 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 SIRPAP78324 504 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 COL10A1Q03692 680 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 P2RY6Q15077 328 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 ZNF658BQ4V348 819 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-201ENST00000328923 TXNDC8Q6A555 127 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 MEX3BQ6ZN04 569 aaKnown RBP10.59□□□□□ -0.71
SHMT2-201ENST00000328923 Q6ZVH6 145 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 Q6ZVU0 165 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 MED25Q71SY5 747 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 TMPRSS12Q86WS5 348 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 C1orf87Q8N0U7 546 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 OR13C9Q8NGT0 318 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 SLC35E1Q96K37 410 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 MIEN1Q9BRT3 115 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 COMMD4Q9H0A8 199 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 PCBD2Q9H0N5 130 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 ARV1Q9H2C2 271 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 ADAM29Q9UKF5 820 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 TMED7Q9Y3B3 224 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 ETV7Q9Y603 341 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 DENND4CQ5VZ89 1909 aa10.59□□□□□ -0.71
SHMT2-201ENST00000328923 CDC42EP2O14613 210 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 BPNT1O95861 308 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 IL2RAP01589 272 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 CSTBP04080 98 aaKnown RBP10.58□□□□□ -0.72
SHMT2-201ENST00000328923 ZGLP1P0C6A0 271 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 FUT1P19526 365 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 SLC25A1P53007 311 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 TRA2BP62995 288 aaKnown RBP10.58□□□□□ -0.72
SHMT2-201ENST00000328923 UBE2V1Q13404 147 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 CEBPEQ15744 281 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 RPUSD3Q6P087 351 aaKnown RBP10.58□□□□□ -0.72
SHMT2-201ENST00000328923 C22orf39Q6P5X5 142 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 PRSS54Q6PEW0 395 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 NRMQ8IXM6 262 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 LILRA3Q8N6C8 439 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-201ENST00000328923 LMNTD1Q8N9Z9 388 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 ADAD2Q8NCV1 583 aaKnown RBP10.58□□□□□ -0.72
SHMT2-201ENST00000328923 ANKRD9Q96BM1 317 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-201ENST00000328923 MS4A8Q9BY19 250 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 NMES1Q9C002 83 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 ZCCHC3Q9NUD5 404 aaKnown RBP10.58□□□□□ -0.72
SHMT2-201ENST00000328923 FKBP11Q9NYL4 201 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 NTNG1Q9Y2I2 539 aa10.58□□□□□ -0.72
SHMT2-201ENST00000328923 WDR45Q9Y484 360 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms