RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 JSRP1Q96MG2 331 aaPredicted RBP12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 F5H5K5 113 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 UBBP0CG47 229 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 FOSL2P15408 326 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 RPS27AP62979 156 aaKnown RBP12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 UBA52P62987 128 aaKnown RBP12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 PCK2Q16822 640 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 POC1BQ8TC44 478 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 MRGPRFQ96AM1 343 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 RAB3CQ96E17 227 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 MYOTQ9UBF9 498 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 ZNF878C9JN71 531 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 ZNF208O43345 1280 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 ZFAND5O76080 213 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 BPNT1O95861 308 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 PLPPR5Q32ZL2 321 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 THEM4Q5T1C6 240 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 LCN10Q6JVE6 187 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 ATRAIDQ6UW56 229 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 NAA40Q86UY6 237 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 TMEM185AQ8NFB2 350 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 EDEM2Q9BV94 578 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 A0A1B0GTI1 187 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 A8MXK9 166 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 SDCBPO00560 298 aaPredicted RBP12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 PLATP00750 562 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 JMJD6Q6NYC1 403 aaPredicted RBP12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 GALNTL5Q7Z4T8 443 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 CPEB2Q7Z5Q1 589 aaKnown RBP12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 LIN37Q96GY3 246 aaPredicted RBP12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 TNFSF18Q9UNG2 199 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 WIF1Q9Y5W5 379 aa12.44□□□□□ -0.42
ATP2C1-201ENST00000328560 IGHV3-15A0A0B4J1V0 119 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 SULT2B1O00204 365 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 SSX5O60225 188 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 HPP00738 406 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 MELTFP08582 738 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 FGF2P09038 288 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 SERPINF1P36955 418 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 GUCA1AP43080 201 aaPredicted RBP12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 CX3CR1P49238 355 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 CLDN17P56750 224 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 NOXO1Q8NFA2 376 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 ROBO4Q8WZ75 1007 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 MRGPRX4Q96LA9 322 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 TMEM59Q9BXS4 323 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 VPS13AQ96RL7 3174 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 NUP210LQ5VU65 1888 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 A0A1B0GW55 424 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 C5orf63A6NC05 138 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 DUX4L2P0CJ85 424 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 DUX4L3P0CJ86 424 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 DUX4L4P0CJ87 422 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 DUX4L5P0CJ88 424 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 DUX4L6P0CJ89 424 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 DUX4L7P0CJ90 424 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 LYPD6Q86Y78 171 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 LRRC18Q8N456 261 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 KCNRGQ8N5I3 272 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 NUBPLQ8TB37 319 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 DCUN1D4Q92564 292 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 DUX4Q9UBX2 424 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 CELA2AP08217 269 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 CALCRP30988 508 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 CCL7P80098 99 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 MICBQ29980 383 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 OR2W3Q7Z3T1 314 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 FOXRED2Q8IWF2 684 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 SLC22A8Q8TCC7 542 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 EDAQ92838 391 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 PTX4Q96A99 478 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 PGAM5Q96HS1 289 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 ARHGAP5-AS1Q96IT6 56 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 WDR77Q9BQA1 342 aaPredicted RBP12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 MRPL13Q9BYD1 178 aaKnown RBP12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 SHARPINQ9H0F6 387 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 LPAR5Q9H1C0 372 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 RHBDD3Q9Y3P4 386 aa12.43□□□□□ -0.42
ATP2C1-201ENST00000328560 RNF222A6NCQ9 220 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 CDK2AP1O14519 115 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 EFSO43281 561 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 CD8AP01732 235 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 SUMO3P55854 103 aaPredicted RBP12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 PLAC9Q5JTB6 97 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 TMPPEQ6ZT21 453 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 ACOT7LQ6ZUV0 252 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 MITD1Q8WV92 249 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 MRPS24Q96EL2 167 aaKnown RBP12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 UQCC2Q9BRT2 126 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 ASF1BQ9NVP2 202 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 CSAG2Q9Y5P2 127 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 A0A0A6YYD4 124 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 TOX3O15405 576 aaPredicted RBP12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 BCL2L11O43521 198 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 TRAF3IP2O43734 574 aaPredicted RBP12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 ADAP1O75689 374 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 OR2F2O95006 317 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 PGA4P0DJD7 388 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 PGA3P0DJD8 388 aa12.42□□□□□ -0.42
ATP2C1-201ENST00000328560 OR3A2P47893 321 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms