RNA–Protein interactions for RNA: ENST00000307548.2

SHANK2-AS3-201, SHANK2 antisense RNA 3, humanhuman

TSL 1 (best) BASIC

Gene SHANK2-AS3, Length 1,683 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3-201ENST00000307548 SCAND1P57086 179 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 HGFACQ04756 655 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 GSG1Q2KHT4 349 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 HIKESHIQ53FT3 197 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 SPANXN2Q5MJ10 180 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 METAP1DQ6UB28 335 aaPredicted RBP11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 C17orf78Q8N4C9 275 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 ZNF610Q8N9Z0 462 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 OR5D14Q8NGL3 314 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 OR1J2Q8NGS2 313 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 SPSB4Q96A44 273 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 FGGYQ96C11 551 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 POM121L2Q96KW2 1035 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 LYZL4Q96KX0 146 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 SOSTQ9BQB4 213 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 NOX3Q9HBY0 568 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 OBP2BQ9NPH6 170 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 DAPK2Q9UIK4 370 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 V9GYS6 101 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 NBASA2RRP1 2371 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 RTTNQ86VV8 2226 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 LOC100509620A0A075B734 347 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 C5orf63A6NC05 138 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 PYCARD-AS1I3L0S3 204 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 RGS5O15539 181 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 MTRF1O75570 445 aaKnown RBP11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 ANOS1P23352 680 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 PTBP1P26599 531 aaKnown RBP eCLIP11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 STOMP27105 288 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 OPRM1P35372 400 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 CASP6P55212 293 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 SFRP5Q5T4F7 317 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 TMEM211Q6ICI0 200 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 FAM166AQ6J272 317 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 PGAP1Q75T13 922 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 LYPD6Q86Y78 171 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 CDH26Q8IXH8 852 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 FOXRED1Q96CU9 486 aaPredicted RBP11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 ADAT3Q96EY9 351 aaPredicted RBP11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 CEP19Q96LK0 163 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 COMMD3Q9UBI1 195 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 ADAM30Q9UKF2 790 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 SPATA2Q9UM82 520 aa11.14□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 INTS1Q8N201 2190 aaKnown RBP11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 TENM4Q6N022 2769 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 CIB4A0PJX0 185 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 ANXA2P2A6NMY6 339 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 MSTNO14793 375 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 LMX1BO60663 402 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 DHRS3O75911 302 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 LCATP04180 440 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 CALCBP10092 127 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 SLC2A2P11168 524 aaPredicted RBP11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 EVX1P49640 407 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 UBE2NP61088 152 aaKnown RBP11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 IGFBP7Q16270 282 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 SNAI3Q3KNW1 292 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 GLT8D1Q68CQ7 371 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 LIX1LQ8IVB5 337 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 ZNF584Q8IVC4 421 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 LAX1Q8IWV1 398 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 FAM169BQ8N8A8 192 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 NKAIN3Q8N8D7 197 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 OPN3Q9H1Y3 402 aaPredicted RBP11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 PIGMQ9H3S5 423 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 TAS2R4Q9NYW5 299 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 ZNF629Q9UEG4 869 aaPredicted RBP11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 N6AMT1Q9Y5N5 214 aa11.13□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 H3BSH0 61 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 J3QW42 95 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 TBX1O43435 398 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 XRCC2O43543 280 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 ICMTO60725 284 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 MAS1P04201 325 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 ALDOBP05062 364 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 ERCC1P07992 297 aaPredicted RBP11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 CBR1P16152 277 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 THBS4P35443 961 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 RANBP1P43487 201 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 C1orf100Q5SVJ3 147 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 UTS2BQ765I0 119 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 KRT74Q7RTS7 529 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 MDP1Q86V88 176 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 LRRC28Q86X40 367 aaPredicted RBP11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 WDR31Q8NA23 367 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 OR1M1Q8NGA1 313 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 PP6455Q8WZ26 134 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 AKAP1Q92667 903 aaKnown RBP eCLIP11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 RND1Q92730 232 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 FAM71F1Q96KD3 344 aaPredicted RBP11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 SOX7Q9BT81 388 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 MOV10Q9HCE1 1003 aaKnown RBP11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 TMEM138Q9NPI0 162 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 CYSLTR2Q9NS75 346 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 RELNP78509 3460 aa11.12□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 CCL21O00585 134 aa11.11□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 SLC17A2O00624 439 aa11.11□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 HPGDSO60760 199 aa11.11□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 RAD51DO75771 328 aa11.11□□□□□ -0.63
SHANK2-AS3-201ENST00000307548 LYZL6O75951 148 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms