RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CNN3Q15417 329 aaKnown RBP9.56□□□□□ -0.88
SMIM4-201ENST00000307106 RSPO1Q2MKA7 263 aaPredicted RBP9.56□□□□□ -0.88
SMIM4-201ENST00000307106 MESTQ5EB52 335 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 HIST2H3PS2Q5TEC6 136 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 BLOC1S3Q6QNY0 202 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 HIST2H3AQ71DI3 136 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 MAVSQ7Z434 540 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 FUNDC1Q8IVP5 155 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 GLB1L2Q8IW92 636 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 LRRC29Q8WV35 223 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 RASSF5Q8WWW0 418 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 Q96M85 177 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 PAIP2Q9BPZ3 127 aaKnown RBP9.56□□□□□ -0.88
SMIM4-201ENST00000307106 CHID1Q9BWS9 393 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 POLR2J2Q9GZM3 115 aaKnown RBP9.56□□□□□ -0.88
SMIM4-201ENST00000307106 POLR2J3Q9H1A7 115 aaKnown RBP9.56□□□□□ -0.88
SMIM4-201ENST00000307106 MUC13Q9H3R2 512 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 THAP1Q9NVV9 213 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 CCDC167Q9P0B6 97 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 NDUFAF1Q9Y375 327 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 ADAM18Q9Y3Q7 739 aa9.56□□□□□ -0.88
SMIM4-201ENST00000307106 A0A1W2PQ09 198 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 F5H5K5 113 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 KHDRBS3O75525 346 aaKnown RBP9.55□□□□□ -0.88
SMIM4-201ENST00000307106 CLIC3O95833 236 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 CHRM2P08172 466 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 SELLP14151 372 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 AMY2BP19961 511 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 TNFRSF1BP20333 461 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 PAICSP22234 425 aaKnown RBP9.55□□□□□ -0.88
SMIM4-201ENST00000307106 GSK3BP49841 420 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 FHL1Q13642 323 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 TMEM95Q3KNT9 176 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 KRTAP27-1Q3LI81 207 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 NKAPLQ5M9Q1 402 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 CORO6Q6QEF8 472 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 CCDC121Q6ZUS5 278 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.55□□□□□ -0.88
SMIM4-201ENST00000307106 OAFQ86UD1 273 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 NAA40Q86UY6 237 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 OR5AU1Q8NGC0 362 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 SEH1LQ96EE3 360 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 ZNF570Q96NI8 536 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 SYT4Q9H2B2 425 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 RNPEPL1Q9HAU8 725 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 SSU72Q9NP77 194 aaKnown RBP9.55□□□□□ -0.88
SMIM4-201ENST00000307106 TCF19Q9Y242 345 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 LHFPL6Q9Y693 200 aa9.55□□□□□ -0.88
SMIM4-201ENST00000307106 HUWE1Q7Z6Z7 4374 aaKnown RBP9.54□□□□□ -0.88
SMIM4-201ENST00000307106 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.54□□□□□ -0.88
SMIM4-201ENST00000307106 HTR3EA5X5Y0 456 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 GGT3PA6NGU5 568 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 H0YAE9 185 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.54□□□□□ -0.88
SMIM4-201ENST00000307106 SYNGR1O43759 233 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 SNNO75324 88 aaPredicted RBP9.54□□□□□ -0.88
SMIM4-201ENST00000307106 ZFPL1O95159 310 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 GRK5P34947 590 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 GGT2P36268 569 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 VDAC2P45880 294 aaPredicted RBP9.54□□□□□ -0.88
SMIM4-201ENST00000307106 TGM4P49221 684 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 CRYBA2P53672 197 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 MTPNP58546 118 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 MZT1Q08AG7 82 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 MPP2Q14168 576 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 KCNMB1Q16558 191 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 MEP1BQ16820 701 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 ANKDD1AQ495B1 522 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 RABL3Q5HYI8 236 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 Q6ZS46 218 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 TMEM219Q86XT9 240 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 SDR9C7Q8NEX9 313 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 OR5D13Q8NGL4 314 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 OR13C2Q8NGS9 318 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMIM4-201ENST00000307106 C12orf43Q96C57 262 aaKnown RBP9.54□□□□□ -0.88
SMIM4-201ENST00000307106 DUS3LQ96G46 650 aaKnown RBP9.54□□□□□ -0.88
SMIM4-201ENST00000307106 MAP6Q96JE9 813 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 C14orf119Q9NWQ9 140 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 ADA2Q9NZK5 511 aa9.54□□□□□ -0.88
SMIM4-201ENST00000307106 MRPL15Q9P015 296 aaKnown RBP9.54□□□□□ -0.88
SMIM4-201ENST00000307106 TSSC4Q9Y5U2 329 aaPredicted RBP9.54□□□□□ -0.88
SMIM4-201ENST00000307106 HYDINQ4G0P3 5121 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 TCRBV4S1A1TA0A5B7 111 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 EFCAB9A8MZ26 197 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 BHLHE40O14503 412 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 IMPA2O14732 288 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 ALDOBP05062 364 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 CD14P08571 375 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 CCDC159P0C7I6 412 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 SLC9A3P48764 834 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 MRPL19P49406 292 aaKnown RBP9.53□□□□□ -0.88
SMIM4-201ENST00000307106 ZNF92Q03936 586 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 KRR1Q13601 381 aaKnown RBP9.53□□□□□ -0.88
SMIM4-201ENST00000307106 SELPLGQ14242 412 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 PLA1AQ53H76 456 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 TCTEX1D4Q5JR98 221 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 ATPAF1Q5TC12 328 aaPredicted RBP9.53□□□□□ -0.88
SMIM4-201ENST00000307106 STUMQ69YW2 141 aa9.53□□□□□ -0.88
SMIM4-201ENST00000307106 DLEU7Q6UYE1 221 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms