RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 DMWDQ09019 674 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 SSX2Q16385 188 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 FAM27D1Q5T7N8 215 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 SMIM4Q8WVI0 70 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 OPA3Q9H6K4 179 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 ST3GAL6Q9Y274 331 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 DOCK5Q9H7D0 1870 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 IGHV3-64DA0A0J9YX35 117 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 K7EQS6 105 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 SLC17A2O00624 439 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 HLA-HP01893 362 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 OR4E1P0C645 316 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 NAA40Q86UY6 237 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 TECTBQ96PL2 329 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 PIGMQ9H3S5 423 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 C20orf141Q9NUB4 165 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 PPP1R3CQ9UQK1 317 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 FAM221AA4D161 298 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 JTBO76095 146 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 HEXAP06865 529 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 HOXB3P14651 431 aaPredicted RBP14.35□□□□□ -0.11
USP42-201ENST00000306177 PSMB6P28072 239 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 GPR12P47775 334 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 SUB1P53999 127 aaKnown RBP eCLIP14.35□□□□□ -0.11
USP42-201ENST00000306177 C21orf58P58505 322 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 OR1C1Q15619 314 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 PP6455Q8WZ26 134 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 SUCNR1Q9BXA5 334 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 FLVCR2Q9UPI3 526 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 LRRC37AA6NMS7 1700 aa14.35□□□□□ -0.11
USP42-201ENST00000306177 LGALS8O00214 317 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 GLI4P10075 376 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 FCGR2CP31995 323 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 GSK3AP49840 483 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 FUT6P51993 359 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 HMGA2P52926 109 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 SCGB2A2Q13296 93 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 ZIC1Q15915 447 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 SFT2D1Q8WV19 159 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 ANKRD37Q7Z713 158 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 C1orf87Q8N0U7 546 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 OSR2Q8N2R0 312 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 MFSD4AQ8N468 514 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 GPX8Q8TED1 209 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 TERTO14746 1132 aaKnown RBP14.34□□□□□ -0.11
USP42-201ENST00000306177 ATF1P18846 271 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 DCTDP32321 178 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 MMP15P51511 669 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 AKR7LQ8NHP1 331 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 SHISA8B8ZZ34 492 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 ARPC3O15145 178 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 CNIH1O95406 144 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 BAK1Q16611 211 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 FAM122BQ7Z309 247 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 WFDC8Q8IUA0 241 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 OR10G3Q8NGC4 313 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 APOBEC3DQ96AK3 386 aaPredicted RBP14.34□□□□□ -0.11
USP42-201ENST00000306177 LIN7CQ9NUP9 197 aaKnown RBP14.34□□□□□ -0.11
USP42-201ENST00000306177 TAF1LQ8IZX4 1826 aa14.34□□□□□ -0.11
USP42-201ENST00000306177 OR5H14A6NHG9 310 aa14.33□□□□□ -0.11
USP42-201ENST00000306177 FAHP16930 419 aa14.33□□□□□ -0.11
USP42-201ENST00000306177 GPNMBQ14956 572 aa14.33□□□□□ -0.11
USP42-201ENST00000306177 PNLIPRP3Q17RR3 467 aa14.33□□□□□ -0.11
USP42-201ENST00000306177 ZNF705GA8MUZ8 300 aaPredicted RBP14.33□□□□□ -0.12
USP42-201ENST00000306177 ALG1L2C9J202 215 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 CELA2BP08218 269 aaPredicted RBP14.33□□□□□ -0.12
USP42-201ENST00000306177 SSTP61278 116 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 FAM199XQ6PEV8 388 aaPredicted RBP14.33□□□□□ -0.12
USP42-201ENST00000306177 SMIM15Q7Z3B0 74 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 CCDC71Q8IV32 467 aaPredicted RBP14.33□□□□□ -0.12
USP42-201ENST00000306177 MARCH1Q8TCQ1 289 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 IER2Q9BTL4 223 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 ZFP92A6NM28 416 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 TXNL1O43396 289 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 EPHA8P29322 1005 aaPredicted RBP14.33□□□□□ -0.12
USP42-201ENST00000306177 FGF9P31371 208 aaPredicted RBP14.33□□□□□ -0.12
USP42-201ENST00000306177 SNRPNP63162 240 aaKnown RBP14.33□□□□□ -0.12
USP42-201ENST00000306177 WIPI1Q5MNZ9 446 aaPredicted RBP14.33□□□□□ -0.12
USP42-201ENST00000306177 TMEM268Q5VZI3 342 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 CD300LDQ6UXZ3 194 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 C15orf54Q8N8G6 183 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 DEFB108BQ8NET1 73 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 OR1F12Q8NHA8 337 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 TERB2Q8NHR7 220 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 CMTM3Q96MX0 182 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 P4HTMQ9NXG6 502 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 MPLP40238 635 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 UBE2MP61081 183 aaKnown RBP14.33□□□□□ -0.12
USP42-201ENST00000306177 ZNF831Q5JPB2 1677 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 ARFGEF1Q9Y6D6 1849 aa14.33□□□□□ -0.12
USP42-201ENST00000306177 SERPINE3A8MV23 424 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 ZIC2O95409 532 aaPredicted RBP14.32□□□□□ -0.12
USP42-201ENST00000306177 H2AFB1P0C5Y9 115 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 ELLP55199 621 aaPredicted RBP14.32□□□□□ -0.12
USP42-201ENST00000306177 Q6ZRG5 221 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 CCDC190Q86UF4 302 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 DTWD2Q8NBA8 298 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 DLL4Q9NR61 685 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 BRWD1Q9NSI6 2320 aa14.32□□□□□ -0.12
USP42-201ENST00000306177 FABP1P07148 127 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms