RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 OR56B4Q8NH76 319 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 GIMAP1Q8WWP7 306 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 UQCC2Q9BRT2 126 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 GPR35Q9HC97 309 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 NKIRAS2Q9NYR9 191 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 PLEK2Q9NYT0 353 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 B4GALT7Q9UBV7 327 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 BOLA1Q9Y3E2 137 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 A0A0U1RQV5 110 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 NAP1L6A6NFF2 107 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 SMLR1H3BR10 107 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 RAB27BO00194 218 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 NKX2-8O15522 239 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 IGHV3-9P01782 118 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 CST2P09228 141 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 ZNF20P17024 532 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 CXCL3P19876 107 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 RAB6AP20340 208 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 PRSS3P35030 304 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 ZNF93P35789 620 aaPredicted RBP5.73□□□□□ -1.49
USP47-201ENST00000305481 SLC6A9P48067 706 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 MEOX1P50221 254 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 NUBP1P53384 320 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 CEACAM16Q2WEN9 425 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 KRTAP27-1Q3LI81 207 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 RIPPLY2Q5TAB7 128 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 SLC25A25Q6KCM7 469 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 ZNF774Q6NX45 483 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 ZNF627Q7L945 461 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 NOXA1Q86UR1 476 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 OR4C16Q8NGL9 310 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 CMBLQ96DG6 245 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 PGAM5Q96HS1 289 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 CYYR1Q96J86 154 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 OR10A4Q9H209 315 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 MOV10Q9HCE1 1003 aaKnown RBP5.73□□□□□ -1.49
USP47-201ENST00000305481 ZNF224Q9NZL3 707 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 CSAG2Q9Y5P2 127 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 V9GYS6 101 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 M0R135 149 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 SGCEO43556 437 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 OR3A4PP47883 348 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 VEGFCP49767 419 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 C3AR1Q16581 482 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 RNFT1Q5M7Z0 435 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 TSPO2Q5TGU0 170 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 PGAP1Q75T13 922 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.73□□□□□ -1.49
USP47-201ENST00000305481 ANGPTL5Q86XS5 388 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 SKA3Q8IX90 412 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 ACBD4Q8NC06 268 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 PRSS33Q8NF86 280 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 FAM46BQ96A09 425 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 TMEM45BQ96B21 275 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 PHF21AQ96BD5 680 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 SGK3Q96BR1 496 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 ZNF799Q96GE5 643 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 SPOCK3Q9BQ16 436 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 OR51J1Q9H342 316 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 PLSCR3Q9NRY6 295 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 FAM86C1Q9NVL1 165 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 PAQR5Q9NXK6 330 aaPredicted RBP5.73□□□□□ -1.49
USP47-201ENST00000305481 LIPGQ9Y5X9 500 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 ZFHX2Q9C0A1 2572 aaPredicted RBP5.73□□□□□ -1.49
USP47-201ENST00000305481 DNAJC13O75165 2243 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 FREM1Q5H8C1 2179 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 OR6C6A6NF89 314 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 TMEM14DPA8MWL7 114 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 ICMTO60725 284 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 LRP3O75074 770 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 BPNT1O95861 308 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 CD3DP04234 171 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 ZNF32P17041 273 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 SOX8P57073 446 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 PPIAP62937 165 aaKnown RBP5.72□□□□□ -1.49
USP47-201ENST00000305481 PSG4Q00888 419 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 RAB35Q15286 201 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 SF3B4Q15427 424 aaKnown RBP eCLIP5.72□□□□□ -1.49
USP47-201ENST00000305481 Q5BKY6 102 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 ZFP62Q8NB50 900 aaPredicted RBP5.72□□□□□ -1.49
USP47-201ENST00000305481 TMEM104Q8NE00 496 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 AKR7LQ8NHP1 331 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 FNDC9Q8TBE3 224 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 AQP3Q92482 292 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 DVL3Q92997 716 aaPredicted RBP5.72□□□□□ -1.49
USP47-201ENST00000305481 FOXB1Q99853 325 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 ACTR6Q9GZN1 396 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 ZNF552Q9H707 407 aaPredicted RBP5.72□□□□□ -1.49
USP47-201ENST00000305481 FBLN5Q9UBX5 448 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 RAB22AQ9UL26 194 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 KLF13Q9Y2Y9 288 aaPredicted RBP5.72□□□□□ -1.49
USP47-201ENST00000305481 A0A0A6YYD4 124 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 LOC105371267A0A1B0GV96 52 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 TMEM235A6NFC5 223 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 ARPC1BO15143 372 aaKnown RBP5.72□□□□□ -1.49
USP47-201ENST00000305481 DHRS3O75911 302 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 NDUFB6O95139 128 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 FAHP16930 419 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 CD82P27701 267 aa5.72□□□□□ -1.49
USP47-201ENST00000305481 RAD52P43351 418 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms