RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 HSPB6O14558 160 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 FCGR2AP12318 317 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 IL2RGP31785 369 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 HIST2H3PS2Q5TEC6 136 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 CA13Q8N1Q1 262 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 OR10AC1Q8NH08 325 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 GPR119Q8TDV5 335 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 HES7Q9BYE0 225 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 ATP23Q9Y6H3 246 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 DNAJB6O75190 326 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 WNT11O96014 354 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 CRYAAP02489 173 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 SDHAP31040 664 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 CX3CR1P49238 355 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 CLDN15P56746 228 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 OGFOD3Q6PK18 319 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 C5orf46Q6UWT4 87 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 SLC25A43Q8WUT9 341 aaPredicted RBP12.1□□□□□ -0.47
HPS3-201ENST00000296051 HAS2Q92819 552 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 TCEAL7Q9BRU2 100 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 UNKLQ9H9P5 680 aaKnown RBP12.1□□□□□ -0.47
HPS3-201ENST00000296051 ZFP57Q9NU63 452 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 PROCRQ9UNN8 238 aa12.1□□□□□ -0.47
HPS3-201ENST00000296051 RFPL4AA6NLU0 287 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 RFPL4AL1F8VTS6 287 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 CXCL2P19875 107 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 OR8B8Q15620 311 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 PWWP2BQ6NUJ5 590 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 SLC22A24Q8N4F4 322 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 BVESQ8NE79 360 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 SLC30A7Q8NEW0 376 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 AKR1E2Q96JD6 320 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 OR5B12Q96R08 314 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 MED29Q9NX70 200 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 PRR13Q9NZ81 148 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 A0A096LPE4 126 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 A0A1W2PPZ6 126 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 FAM221AA4D161 298 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 MPC2O95563 127 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 CRYABP02511 175 aaKnown RBP12.09□□□□□ -0.47
HPS3-201ENST00000296051 CHATP28329 748 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 TRA2AQ13595 282 aaKnown RBP eCLIP12.09□□□□□ -0.47
HPS3-201ENST00000296051 EIF2S3LQ2VIR3 472 aaKnown RBP12.09□□□□□ -0.47
HPS3-201ENST00000296051 DMKNQ6E0U4 476 aaPredicted RBP12.09□□□□□ -0.47
HPS3-201ENST00000296051 TMPRSS11FQ6ZWK6 438 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.09□□□□□ -0.47
HPS3-201ENST00000296051 GPR137Q96N19 417 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 STACQ99469 402 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 MTFP1Q9UDX5 166 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 OPN4Q9UHM6 478 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 PPIL1Q9Y3C6 166 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 PRAMEF27A3QJZ7 478 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 C7orf66A4D0T2 115 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 SHOXO15266 292 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 RPA2P15927 270 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 NAGAP17050 411 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 LGALS4P56470 323 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 DOC2BQ14184 412 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 IL11RAQ14626 422 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 ZNF626Q68DY1 528 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 H1FNTQ75WM6 255 aaPredicted RBP12.09□□□□□ -0.47
HPS3-201ENST00000296051 UBE3DQ7Z6J8 389 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 DEFB108BQ8NET1 73 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 C11orf40Q8WZ69 217 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 SLCO5A1Q9H2Y9 848 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 IFT22Q9H7X7 185 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 CYB5R1Q9UHQ9 305 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 RAB22AQ9UL26 194 aa12.09□□□□□ -0.47
HPS3-201ENST00000296051 IMPA2O14732 288 aa12.08□□□□□ -0.47
HPS3-201ENST00000296051 BET1O15155 118 aa12.08□□□□□ -0.47
HPS3-201ENST00000296051 EDDM3BP56851 147 aa12.08□□□□□ -0.47
HPS3-201ENST00000296051 C21orf58P58505 322 aa12.08□□□□□ -0.47
HPS3-201ENST00000296051 CNN3Q15417 329 aaKnown RBP12.08□□□□□ -0.47
HPS3-201ENST00000296051 OR1C1Q15619 314 aa12.08□□□□□ -0.47
HPS3-201ENST00000296051 C4orf17Q53FE4 359 aa12.08□□□□□ -0.47
HPS3-201ENST00000296051 STPG1Q5TH74 334 aa12.08□□□□□ -0.47
HPS3-201ENST00000296051 C11orf87Q6NUJ2 197 aa12.08□□□□□ -0.47
HPS3-201ENST00000296051 SSX9Q7RTT3 188 aa12.08□□□□□ -0.47
HPS3-201ENST00000296051 WWTR1Q9GZV5 400 aa12.08□□□□□ -0.47
HPS3-201ENST00000296051 NEUROG3Q9Y4Z2 214 aa12.08□□□□□ -0.47
HPS3-201ENST00000296051 SERTM1A2A2V5 107 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 OR6C76A6NM76 312 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 XRCC2O43543 280 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 IL5P05113 134 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 GRPP07492 148 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 OPRM1P35372 400 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 RAG2P55895 527 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 MTCP1P56278 107 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 ZAR1Q86SH2 424 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 OR1L3Q8NH93 324 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 OR51E1Q8TCB6 317 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 SSX3Q99909 188 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 JAM3Q9BX67 310 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 ZNF705FA8MVS1 300 aaPredicted RBP12.08□□□□□ -0.48
HPS3-201ENST00000296051 EIF4E2O60573 245 aaKnown RBP12.08□□□□□ -0.48
HPS3-201ENST00000296051 LRP3O75074 770 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 TPPPO94811 219 aa12.08□□□□□ -0.48
HPS3-201ENST00000296051 ZNF705DP0CH99 300 aaPredicted RBP12.08□□□□□ -0.48
HPS3-201ENST00000296051 ZNF705BP0CI00 300 aaPredicted RBP12.08□□□□□ -0.48
HPS3-201ENST00000296051 CDKN2AP42771 156 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms