RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 UBE2QL1A1L167 161 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 RAB40ALP0C0E4 278 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 NHLH2Q02577 135 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 RAB11BQ15907 218 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 TSSK4Q6SA08 328 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 PGAP1Q75T13 922 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 RAB40AQ8WXH6 277 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 MISP3Q96FF7 219 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 MARS2Q96GW9 593 aaKnown RBP11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 C7orf50Q9BRJ6 194 aaKnown RBP11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 GPN1Q9HCN4 374 aaPredicted RBP11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 FOXD3Q9UJU5 478 aaPredicted RBP11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 NPIPA2E9PIF3 369 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 CSRP1P21291 193 aaKnown RBP11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 APOBEC3AP31941 199 aaPredicted RBP11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 LTBRP36941 435 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 PLCXD2Q0VAA5 305 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 RASGEF1BQ0VAM2 473 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 SLC17A1Q14916 467 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 TMEM225Q6GV28 225 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 ANKRD16Q6P6B7 361 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 UNQ6126/PRO20091Q6UXV3 157 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 KCTD9Q7L273 389 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 SELENOHQ8IZQ5 122 aaKnown RBP11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 OR2I1PQ8NGU4 316 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 ASB5Q8WWX0 329 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 ADAT1Q9BUB4 502 aaKnown RBP11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 LANCL2Q9NS86 450 aa11.84□□□□□ -0.51
KCNIP3-201ENST00000295225 SLC22A23A1A5C7 686 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 WIPF3A6NGB9 483 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 RP2O75695 350 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 CTXN2P0C2S0 81 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 CALCBP10092 127 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 RORAP35398 523 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 YPEL5P62699 121 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 TNFRSF9Q07011 255 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 CNN3Q15417 329 aaKnown RBP11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 GSG1LQ6UXU4 331 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 GABRG1Q8N1C3 465 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 FAM71CQ8NEG0 241 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 SEH1LQ96EE3 360 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 SLC6A7Q99884 636 aa11.83□□□□□ -0.51
KCNIP3-201ENST00000295225 A0A1W2PP11 408 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 PRSS37A4D1T9 235 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 C2CD4DB7Z1M9 353 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 ONECUT2O95948 504 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 LIPFP07098 398 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 GIPP09681 153 aaPredicted RBP11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 CAPZBP47756 277 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 RAG2P55895 527 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 OR7A5Q15622 319 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 CDCP2Q5VXM1 449 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 CARD17Q5XLA6 110 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 ZNF660Q6AZW8 331 aaPredicted RBP11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 TMPPEQ6ZT21 453 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 ZNF596Q8TC21 504 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 MCHR2Q969V1 340 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 LCORQ96JN0 433 aaPredicted RBP11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 SIRT7Q9NRC8 400 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 MED11Q9P086 117 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 TMED7Q9Y3B3 224 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 SHISA7A6NL88 538 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 M0QZK8 103 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 VAMP5O95183 116 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 IGHEP01854 428 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 PNMTP11086 282 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 FOLR1P15328 257 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 KLK2P20151 261 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 IGFBP4P22692 258 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 PAX6P26367 422 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 ABCD3P28288 659 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 CSNK1EP49674 416 aaKnown RBP11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 LUMP51884 338 aaPredicted RBP11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 FBXW4P57775 412 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 MRPS11P82912 194 aaKnown RBP11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 CDNFQ49AH0 187 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 ELFN2Q5R3F8 820 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 RGS7BPQ6MZT1 257 aaPredicted RBP11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 TMEM108Q6UXF1 575 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 BAIAP2L2Q6UXY1 529 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 SLC26A10Q8NG04 563 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 OR10H5Q8NGA6 315 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 STOML3Q8TAV4 291 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 OR8B4Q96RC9 309 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 APMAPQ9HDC9 416 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 CUTCQ9NTM9 273 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 KLK13Q9UKR3 277 aa11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 NOP16Q9Y3C1 178 aaKnown RBP11.83□□□□□ -0.52
KCNIP3-201ENST00000295225 RALGAPA1Q6GYQ0 2036 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 LRP4O75096 1905 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 TRBV5-7A0A0A0MS05 114 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 TMED7-TICAM2A0A0A6YYA0 188 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 TRAV14DV4A0A0A6YYC5 116 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 TMEM212A6NML5 194 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 EEF1E1-BLOC1S5C9J1V9 151 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 ATXN7O15265 892 aaPredicted RBP11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 DDAH2O95865 285 aa11.82□□□□□ -0.52
KCNIP3-201ENST00000295225 BGLAPP02818 100 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms