RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 GYPAP02724 150 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 SLC2A1P11166 492 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 PSKH1P11801 424 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 ANOS1P23352 680 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 ENTPD1P49961 510 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 RAG2P55895 527 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 MZT1Q08AG7 82 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 DRAM2Q6UX65 266 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 C17orf107Q6ZR85 190 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 PNLDC1Q8NA58 520 aaKnown RBP10.6□□□□□ -0.71
CD44-203ENST00000278386 SLC37A3Q8NCC5 494 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 OR6K6Q8NGW6 343 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 GATAD2BQ8WXI9 593 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 SLAMF6Q96DU3 332 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 CDRT15Q96T59 188 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 BTBD10Q9BSF8 475 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 SLITRK2Q9H156 845 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 OPA3Q9H6K4 179 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 CENPMQ9NSP4 180 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 MRPL15Q9P015 296 aaKnown RBP10.6□□□□□ -0.71
CD44-203ENST00000278386 LYVE1Q9Y5Y7 322 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 MEGF8Q7Z7M0 2845 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 C5orf63A6NC05 138 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 ZNF878C9JN71 531 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 ATP8B1O43520 1251 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 XRCC2O43543 280 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 CCNB2O95067 398 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 SOX14O95416 240 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 GYPBP06028 91 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 ANXA2P07355 339 aaKnown RBP10.59□□□□□ -0.71
CD44-203ENST00000278386 FMO3P31513 532 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 OTX1P32242 354 aaPredicted RBP10.59□□□□□ -0.71
CD44-203ENST00000278386 BPIFB3P59826 476 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 TIGD6Q17RP2 521 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 C16orf89Q6UX73 402 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 CYP2R1Q6VVX0 501 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 ZNF826PQ6ZT77 177 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 CPLX4Q7Z7G2 160 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 DEFB107AQ8IZN7 70 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 SPERTQ8NA61 448 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 SCCPDHQ8NBX0 429 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 OR8D4Q8NGM9 314 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 OR8S1Q8NH09 359 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 OR4F5Q8NH21 305 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 ZNRF4Q8WWF5 429 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 ST8SIA4Q92187 359 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 TBX15Q96SF7 602 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 KCNJ15Q99712 375 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 CHIAQ9BZP6 476 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 BEX1Q9HBH7 125 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 SMURF1Q9HCE7 757 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 NOX4Q9NPH5 578 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 C14orf119Q9NWQ9 140 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 CD300AQ9UGN4 299 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 TAGLN3Q9UI15 199 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 PKD1L1Q8TDX9 2849 aa10.59□□□□□ -0.71
CD44-203ENST00000278386 IGHV3OR15-7A0A075B7D8 119 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 A0A1B0GUS0 222 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 ANKRD30BLA7E2S9 258 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 NDUFA2O43678 99 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 SNX3O60493 162 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 KRT36O76013 467 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 PTBP3O95758 552 aaKnown RBP10.58□□□□□ -0.72
CD44-203ENST00000278386 LIPFP07098 398 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 MELTFP08582 738 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 MMP9P14780 707 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 HSD11B1P28845 292 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 CX3CR1P49238 355 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 CRMP1Q14194 572 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 GFOD2Q3B7J2 385 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 ZNF362Q5T0B9 420 aaPredicted RBP10.58□□□□□ -0.72
CD44-203ENST00000278386 BRICD5Q6PL45 260 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 Q6YL49 198 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 RASSF6Q6ZTQ3 369 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 FAM90A1Q86YD7 464 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 LINC00471Q8N535 108 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 GCSAMQ8N6F7 178 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 KIR3DL3Q8N743 410 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 ZNF511Q8NB15 262 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 AQP11Q8NBQ7 271 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 PLPP7Q8NBV4 271 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 WFDC12Q8WWY7 111 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 LHX4Q969G2 390 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 WDFY2Q96P53 400 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 TSSK6Q9BXA6 273 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 RASSF4Q9H2L5 321 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 ARMC1Q9NVT9 282 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 NDE1Q9NXR1 346 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 DNAJC27Q9NZQ0 273 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 MMP24Q9Y5R2 645 aa10.58□□□□□ -0.72
CD44-203ENST00000278386 CENPVL3A0A0U1RRI6 287 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 DVL1O14640 695 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 IFNGP01579 166 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 CLUP10909 449 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 ZNF3P17036 446 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 SPI1P17947 270 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 ATP6V1B2P21281 511 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 GRK5P34947 590 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 GYS2P54840 703 aa10.57□□□□□ -0.72
CD44-203ENST00000278386 GRB2P62993 217 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms