RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 PRSS12P56730 875 aa11.02□□□□□ -0.65
CHMP3-201ENST00000263856 CSNK2A1P68400 391 aaPredicted RBP11.02□□□□□ -0.65
CHMP3-201ENST00000263856 HSF1Q00613 529 aa11.02□□□□□ -0.65
CHMP3-201ENST00000263856 RIPPLY1Q0D2K3 151 aa11.02□□□□□ -0.65
CHMP3-201ENST00000263856 TDGQ13569 410 aa11.02□□□□□ -0.65
CHMP3-201ENST00000263856 ELAVL1Q15717 326 aaKnown RBP11.02□□□□□ -0.65
CHMP3-201ENST00000263856 ZNF283Q8N7M2 679 aa11.02□□□□□ -0.65
CHMP3-201ENST00000263856 CSNK2A3Q8NEV1 391 aa11.02□□□□□ -0.65
CHMP3-201ENST00000263856 OR2AJ1Q8NGZ0 328 aa11.02□□□□□ -0.65
CHMP3-201ENST00000263856 ZC3H10Q96K80 434 aaKnown RBP11.02□□□□□ -0.65
CHMP3-201ENST00000263856 EHFQ9NZC4 300 aa11.02□□□□□ -0.65
CHMP3-201ENST00000263856 MS4A18H0YCH9 400 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 SSX5O60225 188 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 LRP3O75074 770 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 DUS4LO95620 317 aaKnown RBP11.01□□□□□ -0.65
CHMP3-201ENST00000263856 GUSBP08236 651 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 SERPINA2P20848 420 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 CD80P33681 288 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 PNLIPRP2P54317 469 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 CLRN1P58418 232 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 MS4A18Q3C1V0 323 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 SHEQ5VZ18 495 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 CLEC18BQ6UXF7 455 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 ZNF813Q6ZN06 617 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 FAM57BQ71RH2 274 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 OR5T2Q8NGG2 359 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 FBXO17Q96EF6 278 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 TMEM59Q9BXS4 323 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 SLC22A11Q9NSA0 550 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 ASH2LQ9UBL3 628 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 URB1O60287 2271 aaKnown RBP11.01□□□□□ -0.65
CHMP3-201ENST00000263856 DRD1P21728 446 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 FOXF1Q12946 379 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 CHAF1BQ13112 559 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 SHHQ15465 462 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 DRAM2Q6UX65 266 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 ZDHHC22Q8N966 263 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 OR51T1Q8NGJ9 327 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 C20orf24Q9BUV8 137 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 ZNF304Q9HCX3 659 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 GPR84Q9NQS5 396 aa11.01□□□□□ -0.65
CHMP3-201ENST00000263856 LSM5Q9Y4Y9 91 aaKnown RBP11.01□□□□□ -0.65
CHMP3-201ENST00000263856 LDLRAD4O15165 306 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 RER1O15258 196 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 TSPAN2O60636 221 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 IGKV3-11P04433 115 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 GLAP06280 429 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 ANOS1P23352 680 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 RAB13P51153 203 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 FOXK1P85037 733 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 RPL7L1Q6DKI1 246 aaKnown RBP11□□□□□ -0.65
CHMP3-201ENST00000263856 OR4A4PQ8NGN8 299 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 TERB2Q8NHR7 220 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 ASB10Q8WXI3 467 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 PHYHIPLQ96FC7 376 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 OR10C1Q96KK4 312 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 NDRG3Q9UGV2 375 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 RHBDD3Q9Y3P4 386 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 TLCD2A6NGC4 264 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 SNAPINO95295 136 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 CRYBA1P05813 215 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 MFAP5Q13361 173 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 HFEQ30201 348 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 C1orf100Q5SVJ3 147 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 ASB13Q8WXK3 278 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 LIN37Q96GY3 246 aaPredicted RBP11□□□□□ -0.65
CHMP3-201ENST00000263856 RNF126Q9BV68 326 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 VN1R1Q9GZP7 353 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 C5orf66Q9H5L9 145 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 RHOFQ9HBH0 211 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 UQCC1Q9NVA1 299 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 BLACEA4D250 179 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 NUDT21O43809 227 aaKnown RBP11□□□□□ -0.65
CHMP3-201ENST00000263856 RAD51DO75771 328 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 MUC1P15941 1255 aaPredicted RBP11□□□□□ -0.65
CHMP3-201ENST00000263856 PPT1P50897 306 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 DAP3P51398 398 aaKnown RBP11□□□□□ -0.65
CHMP3-201ENST00000263856 MRPS21P82921 87 aaKnown RBP11□□□□□ -0.65
CHMP3-201ENST00000263856 TGIF1Q15583 401 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 PLAC9Q5JTB6 97 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 H1FNTQ75WM6 255 aaPredicted RBP11□□□□□ -0.65
CHMP3-201ENST00000263856 OR1L3Q8NH93 324 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 RXFP4Q8TDU9 374 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 TMEM234Q8WY98 164 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 CDC6Q99741 560 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 ESRP2Q9H6T0 727 aaKnown RBP11□□□□□ -0.65
CHMP3-201ENST00000263856 EDARQ9UNE0 448 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 FLVCR1Q9Y5Y0 555 aa11□□□□□ -0.65
CHMP3-201ENST00000263856 VPS13AQ96RL7 3174 aa10.99□□□□□ -0.65
CHMP3-201ENST00000263856 TMEM131Q92545 1883 aa10.99□□□□□ -0.65
CHMP3-201ENST00000263856 A0A0A6YYD4 124 aa10.99□□□□□ -0.65
CHMP3-201ENST00000263856 NDUFA2O43678 99 aa10.99□□□□□ -0.65
CHMP3-201ENST00000263856 MELTFP08582 738 aa10.99□□□□□ -0.65
CHMP3-201ENST00000263856 FOLR1P15328 257 aa10.99□□□□□ -0.65
CHMP3-201ENST00000263856 SWI5Q1ZZU3 235 aa10.99□□□□□ -0.65
CHMP3-201ENST00000263856 ANKRD55Q3KP44 614 aa10.99□□□□□ -0.65
CHMP3-201ENST00000263856 TMEM128Q5BJH2 165 aa10.99□□□□□ -0.65
CHMP3-201ENST00000263856 FAM69BQ5VUD6 431 aa10.99□□□□□ -0.65
CHMP3-201ENST00000263856 RAB19A4D1S5 217 aa10.99□□□□□ -0.65
CHMP3-201ENST00000263856 A6NIZ1 184 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms