RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 MESP1Q9BRJ9 268 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 GSKIPQ9P0R6 139 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 RHBDD3Q9Y3P4 386 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 COL4A2P08572 1712 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 ADH1BP00325 375 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 HKR1P10072 659 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 RABIFP47224 123 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.35□□□□□ -0.27
XRCC1-201ENST00000262887 ANKRD55Q3KP44 614 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 MAMDC2Q7Z304 686 aaPredicted RBP13.35□□□□□ -0.27
XRCC1-201ENST00000262887 GKN2Q86XP6 184 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 POC1AQ8NBT0 407 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 OR52N5Q8NH56 324 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 OR1E3Q8WZA6 343 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 SCARF2Q96GP6 870 aaPredicted RBP13.35□□□□□ -0.27
XRCC1-201ENST00000262887 MARS2Q96GW9 593 aaKnown RBP13.35□□□□□ -0.27
XRCC1-201ENST00000262887 RAB33BQ9H082 229 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 CBY1Q9Y3M2 126 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 R4GMQ9 66 aa13.35□□□□□ -0.27
XRCC1-201ENST00000262887 STMND1H3BQB6 276 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 TCAPO15273 167 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 IFNA2P01563 188 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 PI3P19957 117 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 CTNNB1P35222 781 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 MED25Q71SY5 747 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 PPP1R3BQ86XI6 285 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 C1QL4Q86Z23 238 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 FOXRED2Q8IWF2 684 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 ZNF615Q8N8J6 731 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 DGAT2Q96PD7 388 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 NRSN2Q9GZP1 204 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 OR10A5Q9H207 317 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 LMAN1LQ9HAT1 526 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 GFOD1Q9NXC2 390 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 A0A1W2PPE2 198 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 SCDO00767 359 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 ZNF264O43296 627 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 YIF1AO95070 293 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 HOXB5P09067 269 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 LINC00271P0C7V0 271 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 CTLA4P16410 223 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 HOXA5P20719 270 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 SNCAP37840 140 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 INSM1Q01101 510 aaPredicted RBP13.34□□□□□ -0.27
XRCC1-201ENST00000262887 ZP2Q05996 745 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 RHEBQ15382 184 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 ACKR1Q16570 336 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 GUK1Q16774 197 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 C2orf27AQ580R0 203 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 NSUN5P2Q63ZY6 315 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 RTN4RL2Q86UN3 420 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 OR9K2Q8NGE7 335 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 OR56B1Q8NGI3 324 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 OR1J1Q8NGS3 322 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 KLHDC3Q9BQ90 382 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 UBQLN4Q9NRR5 601 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 OR52A1Q9UKL2 312 aa13.34□□□□□ -0.27
XRCC1-201ENST00000262887 VPS13AQ96RL7 3174 aa13.33□□□□□ -0.27
XRCC1-201ENST00000262887 JTBO76095 146 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 VSIG8P0DPA2 414 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 GNALP38405 381 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 GPR3P46089 330 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 CYB5R2Q6BCY4 276 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 CHRDL2Q6WN34 429 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 KDM8Q8N371 416 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 CA5BP1Q8WTZ4 195 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 SLC25A36Q96CQ1 311 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 EIF5A2Q9GZV4 153 aaKnown RBP13.33□□□□□ -0.28
XRCC1-201ENST00000262887 PARP12Q9H0J9 701 aaKnown RBP13.33□□□□□ -0.28
XRCC1-201ENST00000262887 S1PR5Q9H228 398 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 IGLV1-36A0A0B4J1U3 117 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 FKTNO75072 461 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 SCGNO76038 276 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 HNRNPA1P09651 372 aaKnown RBP eCLIP13.33□□□□□ -0.28
XRCC1-201ENST00000262887 S100A2P29034 98 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 RPL27P61353 136 aaKnown RBP13.33□□□□□ -0.28
XRCC1-201ENST00000262887 SUPT4H1P63272 117 aaKnown RBP13.33□□□□□ -0.28
XRCC1-201ENST00000262887 BTG2P78543 158 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 IL15RAQ13261 267 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 DEFB110Q30KQ9 67 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 MIDNQ504T8 468 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 FNDC7Q5VTL7 733 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 OR2A2Q6IF42 318 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 CDPF1Q6NVV7 123 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 COMMD1Q8N668 190 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 OR52N4Q8NGI2 321 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 OR2I1PQ8NGU4 316 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 TSACCQ96A04 125 aaPredicted RBP13.33□□□□□ -0.28
XRCC1-201ENST00000262887 C2orf88Q9BSF0 95 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 PRDM13Q9H4Q3 707 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 CA14Q9ULX7 337 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 AMDHD2Q9Y303 409 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 MEMO1Q9Y316 297 aa13.33□□□□□ -0.28
XRCC1-201ENST00000262887 UMAD1C9J7I0 102 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 P2RY10O00398 339 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 HCRTR1O43613 425 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 ISG15P05161 165 aa13.32□□□□□ -0.28
XRCC1-201ENST00000262887 CDX1P47902 265 aaPredicted RBP13.32□□□□□ -0.28
XRCC1-201ENST00000262887 KIAA0141Q14154 515 aaPredicted RBP13.32□□□□□ -0.28
XRCC1-201ENST00000262887 FAM78AQ5JUQ0 283 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms